DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gal and bgal-2

DIOPT Version :9

Sequence 1:NP_608978.2 Gene:Gal / 33839 FlyBaseID:FBgn0001089 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_509140.2 Gene:bgal-2 / 180945 WormBaseID:WBGene00019225 Length:642 Species:Caenorhabditis elegans


Alignment Length:672 Identity:210/672 - (31%)
Similarity:322/672 - (47%) Gaps:96/672 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 LIIAVMALTVGLCVGLSGDTDAPEEQPRFTIDHEANTFMLDGQPFRYVSGSFHYFRAVPESWRSR 82
            |:.:|.|...|        ||:   .|.|.||...:.|:|||.||.|::|..||||...:.|..|
 Worm     9 LVCSVFATVFG--------TDS---SPSFKIDTVNSQFLLDGDPFTYIAGEIHYFRIPHQKWDDR 62

  Fly    83 LRTMRASGLNALDTYVEWSLHNPHDGEYN-WEGIADVVKFLEIAQEEDFYIILRPGPYICAERDN 146
            |:.:||.|.||:...|.|:||..:..|.. ..|..|:|||::.|:....|.|||.||||.||.||
 Worm    63 LKRVRALGFNAITVPVPWNLHQFYQDETPILSGNLDLVKFIKAAESNGLYTILRIGPYISAEWDN 127

  Fly   147 GGLPHWLFTKYPSIKMRTNDPNYISEVGKWYAELMPRLQHLFVGNGGKIIMVQVENEYGDYA-CD 210
            ||||.||.......|.|::||::::||.:|:..|:|::..|...|.|.::|||:|:.||... ||
 Worm   128 GGLPWWLIRNTKIGKYRSSDPSFMTEVTQWWKHLLPKIYPLMRKNAGPVLMVQIEHFYGALGICD 192

  Fly   211 HDYLNWLRDETEKYVSGKALLFTVDIP-NEKMSCGKIENVFATTDFGIDRIN--EIDKIWAMLRA 272
            ..||..|.:..::.:....:||||:.| .:.|.||.:.|:..|.:. :...|  ||:..::|.:|
 Worm   193 QQYLLQLANMAKENLGNDVVLFTVNPPVLQFMRCGTLPNILPTIEI-VPNANAGEIESWFSMQKA 256

  Fly   273 LQPTGPLVNSEFYPGWLTHWQEQNQRRDGQEVAN---------ALRTILSYNASVNLYMFFGGTN 328
            .....|.|.|:|.......|        |:.|::         ..:|..:.|||::.:|..||||
 Worm   257 FMQGAPAVASQFLINPFKLW--------GKNVSDPYPNNLIIQTAKTAFALNASLSFHMTHGGTN 313

  Fly   329 FGFTAGANYNLDGGIGYAADITSYDYDAVMDEAGGVTTKY----NLVKAVIGEFLPLPEITLNPA 389
            ||:..||       :......||||..|.:.|||.|...|    |.:..:.|...|...|..| .
 Worm   314 FGYWNGA-------VDPYPVTTSYDSFAPISEAGDVNPLYISIRNWISNIPGWQNPPTPIPAN-L 370

  Fly   390 KRLAYGRVELTPKLTLLSTEGRAALSKGDPVESI--KPKTFEELDLYSGLVLYETELPSMDLDPA 452
            .|.||..|:    ||:..|.....:.......|.  .|:|.|.:....|.:.|.|.:    ::..
 Worm   371 PRTAYPDVQ----LTVFDTISGFIIGANPECWSSPETPRTAEYIRQGYGYIYYNTTI----IECG 427

  Fly   453 LLKIDQINDRAHVFVDQELVGTLSREAQIYSLPLSKGWGS----------------TLQLLVENQ 501
            .|.|....|.|::|::|..||.|.::           :||                :|::::|..
 Worm   428 SLYIPTFADNAYIFLNQNFVGALYKQ-----------FGSIHNNTIDVQGCLDQFNSLEIIIEIT 481

  Fly   502 GRVNFYISNDTKGIFGEVSLQLHNGGYLPLENWRSTAFPLEQSAVELWR-----REHTDEKALDP 561
            ||.:......::||.|.|.::     .:.||||.|...|:|...:.|.:     ::|..| .:|.
 Worm   482 GRDHNNYPVMSRGIQGNVYMR-----NITLENWESCEVPIETYEISLVKNYESLKQHVFE-TIDF 540

  Fly   562 LLARQRILRNGPILYTGSLTV-TEVGDTYLNMAGWGKGVAYVNGFNLGRYWPVAGPQVTLYVPNE 625
            ..::...:.. |.::.|:|.: |...||:|:..||||||..:|.:|:||||...|||.|||:|:|
 Worm   541 EKSQSAAIEQ-PSVFIGNLIIKTAPADTFLDTRGWGKGVVTINQYNIGRYWASIGPQQTLYIPSE 604

  Fly   626 ILKVGENSLVILEYQRANKTAT 647
            .|..|||.::..|::.|....|
 Worm   605 FLHKGENLIMFYEFEGATTACT 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalNP_608978.2 Glyco_hydro_35 54..376 CDD:279624 118/339 (35%)
BetaGal_dom4_5 <570..637 CDD:290101 31/67 (46%)
bgal-2NP_509140.2 Glyco_hydro_35 34..354 CDD:366567 118/335 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162783
Domainoid 1 1.000 284 1.000 Domainoid score I859
eggNOG 1 0.900 - - E1_COG1874
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 412 1.000 Inparanoid score I1040
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52178
OrthoDB 1 1.010 - - D179316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4799
orthoMCL 1 0.900 - - OOG6_100579
Panther 1 1.100 - - O PTHR23421
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1174
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.770

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