DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gal and glb1l

DIOPT Version :10

Sequence 1:NP_608978.2 Gene:Gal / 33839 FlyBaseID:FBgn0001089 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_001116328.1 Gene:glb1l / 100001628 ZFINID:ZDB-GENE-050309-196 Length:629 Species:Danio rerio


Alignment Length:612 Identity:250/612 - (40%)
Similarity:344/612 - (56%) Gaps:45/612 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 FTIDHEANTFMLDGQPFRYVSGSFHYFRAVPESWRSRLRTMRASGLNALDTYVEWSLHNPHDGEY 110
            |:||::.|.|..||:||:|:|||.||.|...|.|:.||..|..:||||:..||.|:.|....|.|
Zfish    27 FSIDYKNNCFRKDGKPFQYISGSIHYSRIPREYWQDRLLKMYMTGLNAIQVYVPWNFHETVQGVY 91

  Fly   111 NWEGIADVVKFLEIAQEEDFYIILRPGPYICAERDNGGLPHWLFTKYPSIKMRTNDPNYISEVGK 175
            |:.|..|:..||.:|.:....:|||||||||||.:.||||.||..| |:|.:|:.|..|:.....
Zfish    92 NFAGDRDLEYFLNLANQTGLLVILRPGPYICAEWEMGGLPAWLLQK-PNIILRSADKEYLQAASD 155

  Fly   176 WYAELMPRLQHLFVGNGGKIIMVQVENEYGDY-ACDHDYLNWLRDETEKYVSGKALLFTVDIPNE 239
            |.|.|:.:::.....|||.||.||||||||.| |||::|:..|......::....:|||.|...:
Zfish   156 WLAVLLAKMRPWLYQNGGNIISVQVENEYGSYFACDYNYMRHLHTLFRLFLGEDVILFTTDGNTD 220

  Fly   240 K-MSCGKIENVFATTDFGIDRINEIDKIWAMLRALQPTGPLVNSEFYPGWLTHWQEQNQRRDGQE 303
            | ||||.:|.::||.|||.|  ..|...:...|..:|.|||||||||.|||.||.:::...|..:
Zfish   221 KEMSCGTLEGLYATIDFGTD--TNITTAFIRQRRFEPKGPLVNSEFYTGWLDHWGDKHASVDTNK 283

  Fly   304 VANALRTILSYNASVNLYMFFGGTNFGFTAGANYNLDGGIGYAADITSYDYDAVMDEAGGVTTKY 368
            |:..|..:||..||||:|||.||||||:..||:::    ..:.:.:|||||:|.:.|||..|.|.
Zfish   284 VSKMLGEMLSMGASVNMYMFEGGTNFGYWNGADHD----TRFRSVVTSYDYNAPLTEAGDPTDKL 344

  Fly   369 NLVKAVIGEFLPLPEITLNPA-KRLAYGRVEL------TPKLTLLSTEGRAALSKGDPVESIKPK 426
            ..::.||..|..:|...:.|| .:||||.|.|      :..|..||.:|        ||.|..|.
Zfish   345 LAIRDVIKNFRDIPVGPMPPATPKLAYGFVTLHKVGNISSLLDTLSPQG--------PVRSQYPL 401

  Fly   427 TFEELDLYSGLVLYETELPS--MDLDPALLKIDQINDRAHVFVDQELVGTLSREAQIYSLPLSKG 489
            ||||:..|.|.:||.|.||.  .:..|.:..::.|:|||:|.|:....|.:.|:..:. :.::..
Zfish   402 TFEEIKQYYGFLLYRTTLPRNVPEPTPLISPLNGIHDRAYVSVNGVYQGLMERDTGLV-MNITGR 465

  Fly   490 WGSTLQLLVENQGRVNF--YISNDTKGIFGEVSLQLHNGGYLPLENWRSTAFPLEQSAVELWRRE 552
            .|..|.:||||.|||||  || ||.||:.|.:.|     |...|.:|......::.:....|.  
Zfish   466 QGDQLDILVENMGRVNFGSYI-NDNKGLLGNLIL-----GNDVLSDWSVYPLDIDTAVANGWL-- 522

  Fly   553 HTDEKALDPLLARQRILRNGPILYTGSLTVT-EVGDTYLNMAGWGKGVAYVNGFNLGRYWPVAGP 616
               :.|...||..   ..:|||.|:|:|..| ...||::.:.||.||..:|||||||||||..||
Zfish   523 ---QSAHSGLLTE---AGDGPIFYSGTLKPTGRAWDTFVKLNGWTKGQVWVNGFNLGRYWPKRGP 581

  Fly   617 QVTLYVPNEILKVGE-NSLVILEYQRA 642
            |.|||||...|...: |::.:||.:||
Zfish   582 QQTLYVPGPFLSANQLNNITVLELERA 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GalNP_608978.2 Glyco_hydro_35 54..376 CDD:396048 143/323 (44%)
BetaGal_dom4_5 <570..637 CDD:463857 34/68 (50%)
glb1lNP_001116328.1 Glyco_hydro_35 36..352 CDD:396048 143/322 (44%)
BetaGal_dom4_5 <536..603 CDD:463857 34/66 (52%)

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