DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and AT2G20740

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_179667.2 Gene:AT2G20740 / 816603 AraportID:AT2G20740 Length:221 Species:Arabidopsis thaliana


Alignment Length:188 Identity:42/188 - (22%)
Similarity:79/188 - (42%) Gaps:28/188 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ISCCLKYLLFASNVILWLSALLVLSVGIW---AWSEKGMFRNIARLHFIALD---PAFV--LIIL 71
            :..||:.:|...|.::.:..:.::...:|   .|.|:     :..|.|...|   |.|:  .:.|
plant     5 VRSCLQSMLKLVNSLIGMVGIAMILYAVWLIRQWQEQ-----MGNLPFADSDHPVPWFIYSFLGL 64

  Fly    72 GGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFI 136
            |.:..::...|.:.|...|.|.|..|..|:.:|.:.|.|..|..|:.:|  |.||...:...||.
plant    65 GAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNRD--WKKDFPEDPSGAFH 127

  Fly   137 RHYREDADQQNLIDWIQEDWLQCCGID----------GP---KDWDSNNYFNCSSIAI 181
            :..:.......:..||....:...|:.          ||   :.:||::.:|.|::|:
plant   128 QFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHYDSDDEYNVSTVAL 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 41/184 (22%)
TM4SF9_like_LEL 118..239 CDD:239412 16/77 (21%)
AT2G20740NP_179667.2 Tetraspanin 15..161 CDD:459767 32/152 (21%)

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