DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp26A and LOC799194

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_001339579.2 Gene:LOC799194 / 799194 -ID:- Length:347 Species:Danio rerio


Alignment Length:316 Identity:95/316 - (30%)
Similarity:142/316 - (44%) Gaps:59/316 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RKFRRETSEISC------CLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDP 64
            |:||...:.:..      .|||||.:||::.....|..|.:|:|....|..|.. .::..|..||
Zfish    70 RRFRFSPASLGTSGWSDYILKYLLISSNLLFTALGLATLVLGLWGLINKESFAQ-EKISGIGTDP 133

  Fly    65 AFVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQAT 129
            ..:.:.||.|..||...|.:||||||.|||..::..:.:|::|:: ..||| :...:..::|...
Zfish   134 MLLFLFLGLVLALLSMTGCIGALRENMCLLRIFSAAVFLLVVAQV-LAAVA-LFSMQAQMEDYLR 196

  Fly   130 EGLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCC 194
            .|:...|..|::|.|.:.:.|.||.. |||||.|..:||:.|.|||||:..:   :|||||.|||
Zfish   197 LGMLTAIVRYQDDLDLRFITDEIQTS-LQCCGADTYRDWEINVYFNCSAPGV---QACGVPPSCC 257

  Fly   195 RRRPQE--VIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMEL 257
             ..|.|  .:.|.|||...::                                      |.....
Zfish   258 -IDPLENGTVWNSQCGVGAQQ--------------------------------------LDEFSA 283

  Fly   258 SKIIYEKGCVQAGEEWMEHNLIIISATVIVVMFFQILGICFAQNLRADIYTQKSKW 313
            ..:|:..||:.:...|||||..:|...|||::..|||.:.....|     ..|.:|
Zfish   284 QSVIFLGGCLGSVARWMEHNGGVIVTVVIVLLGIQILTLFITARL-----LHKIRW 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 73/236 (31%)
DUF2207 <65..157 CDD:303056 29/91 (32%)
TM4SF9_like_LEL 118..239 CDD:239412 37/122 (30%)
LOC799194XP_001339579.2 Tetraspannin 88..332 CDD:278750 90/294 (31%)
oculospanin_like_LEL 185..303 CDD:239420 44/160 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.