DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp26A and tspan34a

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001038906.2 Gene:tspan34a / 751731 ZFINID:ZDB-GENE-060825-202 Length:243 Species:Danio rerio


Alignment Length:270 Identity:66/270 - (24%)
Similarity:120/270 - (44%) Gaps:55/270 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CC---LKYLLFASNVILWLSALLVLSVGIWAWSEK----GMFRNI-------ARLHFIALDPAFV 67
            ||   ||.::|..|.|::|:...||:||||...::    |...:|       |:|..|    .::
Zfish     2 CCKGFLKVMMFVFNGIIFLAGAAVLAVGIWVAVDRVSLLGFLEHIEDAPPELAQLANI----GYL 62

  Fly    68 LIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKD--KGWIKDQATE 130
            ||.:|....::||:|..||::|:.|:|..:.|.:.::.:.|:....|.||.:.  :..:.:...:
Zfish    63 LIGVGAFLAIMGFLGCCGAVKESKCMLLTFFIIVLIIFLVEVAAAVVLFVFEPVVQETLNEIGQK 127

  Fly   131 GLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCR 195
            ..|:...:|.:|....::.:....: |:|||.:...|:..:|:...:|:         .|..||.
Zfish   128 VAKSIKDNYGKDEPFSSIWNTTMNE-LKCCGYNNYTDFSGSNFVEETSM---------YPEKCCS 182

  Fly   196 RRPQEVIKNKQCGYDVRKEGYPVDRNIHE----RGCLRAGEDWLEAH---LISVAIGCVALLVLQ 253
            ...|      :|           |....|    .||.|.....:|.:   |..||:| :|.|.:.
Zfish   183 SGSQ------RC-----------DERAAEDAVIAGCFRTLVKLIEDNALLLAGVALG-IAALEIA 229

  Fly   254 GMELSKIIYE 263
            .|.:|.|:|:
Zfish   230 AMVVSMILYK 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 44/187 (24%)
TM4SF9_like_LEL 118..239 CDD:239412 21/129 (16%)
tspan34aNP_001038906.2 Tetraspanin 7..239 CDD:459767 63/263 (24%)
tetraspanin_LEL <134..213 CDD:239401 20/105 (19%)

Return to query results.
Submit another query.