DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tspan17

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_006517477.1 Gene:Tspan17 / 74257 MGIID:1921507 Length:281 Species:Mus musculus


Alignment Length:314 Identity:126/314 - (40%)
Similarity:178/314 - (56%) Gaps:45/314 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAAVRKFRRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFI-ALDP 64
            ||...::|  :..|:.||.||.||..|::.|:...|.|::|:|||.|||:..||:.|..: .|||
Mouse     1 MPGKHQQF--QDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDP 63

  Fly    65 AFVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQAT 129
            .::.:::|||..:|||.|.:|||||||.||..:::||.::...|:....:|||.||  ||:||..
Mouse    64 VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKD--WIRDQLN 126

  Fly   130 EGLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCC 194
            ..:...::.||:|.|.|||||:.||.| .|||..||.||:.|.||||:.:. .|||.||||||||
Mouse   127 LFINNNVKAYRDDLDLQNLIDFAQEYW-SCCGARGPNDWNLNIYFNCTDLN-PSRERCGVPFSCC 189

  Fly   195 RRRPQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSK 259
            .|.|.|.:.|.|||||:|                                     |.|: :|...
Mouse   190 VRDPAEDVLNTQCGYDIR-------------------------------------LKLE-LEQQG 216

  Fly   260 IIYEKGCVQAGEEWMEHNLIIISATVIVVMFFQILGICFAQNLRADIYTQKSKW 313
            .||.||||...|:|::.|||:::..::.:...||.|:|.||||.:||...|:.|
Mouse   217 SIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQNLVSDIKAVKANW 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 82/175 (47%)
TM4SF9_like_LEL 118..239 CDD:239412 51/120 (43%)
Tspan17XP_006517477.1 Tetraspanin 18..260 CDD:459767 115/283 (41%)
TM4SF9_like_LEL 115..235 CDD:239412 64/161 (40%)

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