DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tspan17

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_006517477.1 Gene:Tspan17 / 74257 MGIID:1921507 Length:281 Species:Mus musculus


Alignment Length:314 Identity:126/314 - (40%)
Similarity:178/314 - (56%) Gaps:45/314 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAAVRKFRRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFI-ALDP 64
            ||...::|  :..|:.||.||.||..|::.|:...|.|::|:|||.|||:..||:.|..: .|||
Mouse     1 MPGKHQQF--QDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDP 63

  Fly    65 AFVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQAT 129
            .::.:::|||..:|||.|.:|||||||.||..:::||.::...|:....:|||.||  ||:||..
Mouse    64 VWLFVVVGGVMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKD--WIRDQLN 126

  Fly   130 EGLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCC 194
            ..:...::.||:|.|.|||||:.||.| .|||..||.||:.|.||||:.:. .|||.||||||||
Mouse   127 LFINNNVKAYRDDLDLQNLIDFAQEYW-SCCGARGPNDWNLNIYFNCTDLN-PSRERCGVPFSCC 189

  Fly   195 RRRPQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSK 259
            .|.|.|.:.|.|||||:|                                     |.|: :|...
Mouse   190 VRDPAEDVLNTQCGYDIR-------------------------------------LKLE-LEQQG 216

  Fly   260 IIYEKGCVQAGEEWMEHNLIIISATVIVVMFFQILGICFAQNLRADIYTQKSKW 313
            .||.||||...|:|::.|||:::..::.:...||.|:|.||||.:||...|:.|
Mouse   217 SIYTKGCVGQFEKWLQDNLIVVAGVLVGIALLQIFGLCLAQNLVSDIKAVKANW 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 96/235 (41%)
DUF2207 <65..157 CDD:303056 39/91 (43%)
TM4SF9_like_LEL 118..239 CDD:239412 51/120 (43%)
Tspan17XP_006517477.1 TM4SF9_like_LEL 115..235 CDD:239412 64/161 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2738
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41762
Inparanoid 1 1.050 235 1.000 Inparanoid score I3390
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D1180379at2759
OrthoFinder 1 1.000 - - FOG0001766
OrthoInspector 1 1.000 - - otm43961
orthoMCL 1 0.900 - - OOG6_106312
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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