DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tspan13

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_079635.1 Gene:Tspan13 / 66109 MGIID:1913359 Length:204 Species:Mus musculus


Alignment Length:185 Identity:43/185 - (23%)
Similarity:70/185 - (37%) Gaps:47/185 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAFVLIILGGVTFLLGFMG 82
            |.|..|.|.|::..|.:||::.:..|...    |..|:.|..:.     |:|.:|...||:..:|
Mouse     8 CSKNCLCALNLLYTLVSLLLIGIAAWGIG----FGLISSLRVVG-----VVIAVGIFLFLIALVG 63

  Fly    83 SVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYREDADQQN 147
            .:||::.:..||..|.|.|.::.|.:.........|.                    ||...|..
Mouse    64 LIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALN--------------------REQQGQLL 108

  Fly   148 LIDW---------IQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSC 193
            .:.|         ||.: |.|||.   :.::.|:  .|.:....|.:.|.   ||
Mouse   109 EVGWNNTASARNDIQRN-LNCCGF---RSYNPND--TCPASCAKSTQKCS---SC 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 42/184 (23%)
TM4SF9_like_LEL 118..239 CDD:239412 17/85 (20%)
Tspan13NP_079635.1 Tetraspanin <55..190 CDD:459767 28/129 (22%)

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