DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tsp42Eb

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_724525.1 Gene:Tsp42Eb / 59177 FlyBaseID:FBgn0042086 Length:222 Species:Drosophila melanogaster


Alignment Length:303 Identity:68/303 - (22%)
Similarity:104/303 - (34%) Gaps:100/303 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPA-------FVLIILG 72
            :|...||||:..|::.....:|::.||....|..|        :|.|.|..       ..:|::|
  Fly     4 LSAMFKYLLYLLNLVFVAGGILLIVVGSIMLSTMG--------NFTAFDGGVNTQTIPICIIVIG 60

  Fly    73 GVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIR 137
            .|||::.|.|..|.:|||.|....|||.:.:|...::......|...||                
  Fly    61 SVTFVVAFFGCCGTIRENACCTTIYAICMLILFGLQLALSIWIFAANDK---------------- 109

  Fly   138 HYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIG-SREACGVPFSCCRR---RP 198
                              :|...|....|.||.||      .|.| ..:|..:.||||..   :.
  Fly   110 ------------------FLSSMGKAVDKAWDENN------AAQGYPMDALQLAFSCCGNTGYQQ 150

  Fly   199 QEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYE 263
            .|.:.:..|||.        ||.   :.|        ||.:.|...||....|            
  Fly   151 YETVPSSCCGYK--------DRT---KVC--------EAEIYSQRPGCRQEFV------------ 184

  Fly   264 KGCVQAGEEWMEHNLIIISATVIVVMF---FQILGICFAQNLR 303
                   :.|..:..:|..:::|:.:|   ..|:..|.|..:|
  Fly   185 -------DFWASNTDLIRWSSLIIALFELGIFIMSCCLASAMR 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 59/245 (24%)
DUF2207 <65..157 CDD:303056 19/98 (19%)
TM4SF9_like_LEL 118..239 CDD:239412 25/124 (20%)
Tsp42EbNP_724525.1 Tetraspannin 8..219 CDD:278750 66/296 (22%)
tetraspanin_LEL 104..191 CDD:239401 31/164 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442899
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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