DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tspan6

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_062630.2 Gene:Tspan6 / 56496 MGIID:1926264 Length:245 Species:Mus musculus


Alignment Length:253 Identity:70/253 - (27%)
Similarity:110/253 - (43%) Gaps:45/253 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRN-IARLHFIALDPAFVLIILG 72
            |.:|..:..|||.:|.....|.|::.:::|:||||.   |....| .:.|:..|.:..||||..|
Mouse     7 RLQTKPVITCLKSVLLIYTFIFWITGVILLAVGIWG---KVSLENYFSLLNEKATNVPFVLIGTG 68

  Fly    73 GVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIR 137
            .|..|||..|.....|.:..:|..||:||:::.:.|:....|.||.:.:  ||:......:..::
Mouse    69 TVIILLGTFGCFATCRASAWMLKLYAMFLTLIFLVELVAAIVGFVFRHE--IKNSFKSNYENALK 131

  Fly   138 HYREDAD-QQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQEV 201
            .|....| :...:|.||.. |.|||:....||...||::          ..|.|.|||       
Mouse   132 EYNSTGDYRSEAVDKIQST-LHCCGVTNYGDWKGTNYYS----------ETGFPKSCC------- 178

  Fly   202 IKNKQCGYDVRKEG-YP---VDRNIHERGCLRAGEDWLEAHL-----ISVAIGCVALL 250
                      :.|| ||   .|: ::|.||.......:|:.:     ||..:.|..|:
Mouse   179 ----------KLEGCYPQRDADK-VNEEGCFIKVMTTIESEMGVVAGISFGVACFQLI 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 52/176 (30%)
TM4SF9_like_LEL 118..239 CDD:239412 29/125 (23%)
Tspan6NP_062630.2 Tetraspanin 17..235 CDD:459767 67/243 (28%)
TM4SF2_6_like_LEL 112..209 CDD:239414 31/127 (24%)

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