DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp26A and Tspan5

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_006501799.1 Gene:Tspan5 / 56224 MGIID:1928096 Length:311 Species:Mus musculus


Alignment Length:277 Identity:115/277 - (41%)
Similarity:157/277 - (56%) Gaps:43/277 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LSVGIWAWSEKGMFRNIARLHFI-ALDPAFVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFL 101
            |.:|:|||:|||:..||:.:..: ..||.::.:::|||.|:|||.|.:|||||||.||..:::||
Mouse    77 LGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFL 141

  Fly   102 SVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPK 166
            .::...|:....:|||.||  |||||....:...||.||:|.|.|||||:.||.| ||||..|..
Mouse   142 GIIFFLELTAGVLAFVFKD--WIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYW-QCCGAFGAD 203

  Fly   167 DWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAG 231
            ||:.|.||||:. :..|||.||||||||.:.|.|.:.|.|||||.|::. .||:.|         
Mouse   204 DWNLNIYFNCTD-SNASRERCGVPFSCCTKDPAEDVINTQCGYDARQKP-EVDQQI--------- 257

  Fly   232 EDWLEAHLISVAIGCVALLVLQGMELSKIIYEKGCVQAGEEWMEHNLIIISATVIVVMFFQILGI 296
                                        :||.||||...|:|::.||.|::...|.:...||.||
Mouse   258 ----------------------------VIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQIFGI 294

  Fly   297 CFAQNLRADIYTQKSKW 313
            |.||||.:||...::.|
Mouse   295 CLAQNLVSDIEAVRASW 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 91/215 (42%)
DUF2207 <65..157 CDD:303056 43/91 (47%)
TM4SF9_like_LEL 118..239 CDD:239412 56/120 (47%)
Tspan5XP_006501799.1 TM4SF9_like_LEL 156..276 CDD:239412 66/161 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 213 1.000 Domainoid score I2738
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 235 1.000 Inparanoid score I3390
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001766
OrthoInspector 1 1.000 - - otm43961
orthoMCL 1 0.900 - - OOG6_106312
Panther 1 1.100 - - LDO PTHR19282
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3915
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.860

Return to query results.
Submit another query.