DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tspan33

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001102697.1 Gene:Tspan33 / 500065 RGDID:1560915 Length:283 Species:Rattus norvegicus


Alignment Length:325 Identity:101/325 - (31%)
Similarity:166/325 - (51%) Gaps:59/325 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAAVRKFRRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPA 65
            :|||   :..|.|.:|..:|||||..|::.|:.::::::||::|   :.|....|.|..:|:|||
  Rat     7 VPAA---YGEEFSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYA---RLMKHAEAALACLAVDPA 65

  Fly    66 FVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATE 130
            .:||::|.:.|||.|.|.:|:||||.|||..:::.|:::.:.::....:.||..||.  :.:.:|
  Rat    66 ILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKA--RGKVSE 128

  Fly   131 GLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCR 195
            .:...|.|||:|.|.|||||:.|:.: .|||....:||..|.|||||. ...|||.|.||:|||.
  Rat   129 IINNAIVHYRDDLDLQNLIDFGQKKF-SCCGGISYRDWSQNMYFNCSE-DNPSRERCSVPYSCCL 191

  Fly   196 RRPQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKI 260
            ..|.:.:.|..||..::                  ..|:|||                    ||:
  Rat   192 PTPNQAVINTMCGQGMQ------------------ALDYLEA--------------------SKV 218

  Fly   261 IYEKGCVQAGEEWMEHNLIIISATVIVVMFFQILGICFAQ--------NLRADIYTQKSK---WH 314
            ||..||:.....|:..||.::....:.:...|::||..:|        .::..:|.|:.:   |:
  Rat   219 IYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGILLSQVLVNQIKDQIKLQLYNQQHRADPWY 283

  Fly   315  314
              Rat   284  283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 79/234 (34%)
DUF2207 <65..157 CDD:303056 35/91 (38%)
TM4SF9_like_LEL 118..239 CDD:239412 43/120 (36%)
Tspan33NP_001102697.1 penumbra_like_LEL 116..236 CDD:239411 52/161 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.830

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