DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and tspan17

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001006754.1 Gene:tspan17 / 448429 XenbaseID:XB-GENE-954574 Length:270 Species:Xenopus tropicalis


Alignment Length:301 Identity:125/301 - (41%)
Similarity:171/301 - (56%) Gaps:43/301 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFI-ALDPAFVLIILGGVTFL 77
            |:|||:||.||..|::.||.....|::|:|||:|||:..||:.:..: ..||.::.|:.|.|.|:
 Frog    12 EVSCCVKYFLFGFNIVFWLLGAAFLAIGLWAWAEKGVLSNISSITDLGGFDPVWLFIVTGAVMFV 76

  Fly    78 LGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYRED 142
            |||.|.:|||||||.||..:::||.::...|:....:|||.||  |||||....:...::.||:|
 Frog    77 LGFAGCIGALRENTTLLKFFSVFLGLIFFLELTAGILAFVFKD--WIKDQLNFFINNNVKAYRDD 139

  Fly   143 ADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQEVIKNKQC 207
            .|.|||||:.||.| .|||..||.||:.|.||||:. :..|||.||||||||.:.|.|.:.|.||
 Frog   140 IDLQNLIDFAQEYW-SCCGAHGPNDWNLNIYFNCTD-SNPSRERCGVPFSCCVKDPAEDVPNTQC 202

  Fly   208 GYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYEKGCVQAGEE 272
            |||||                                     |.|: :|....||.||||...|:
 Frog   203 GYDVR-------------------------------------LKLE-LEQQSYIYTKGCVGQFEK 229

  Fly   273 WMEHNLIIISATVIVVMFFQILGICFAQNLRADIYTQKSKW 313
            |::.|||:::...:.:...||.|||.||||.:||...|:.|
 Frog   230 WLQDNLIVVAGVFVAIALLQIFGICLAQNLVSDIKAVKANW 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 82/175 (47%)
TM4SF9_like_LEL 118..239 CDD:239412 52/120 (43%)
tspan17NP_001006754.1 Tetraspanin 17..260 CDD:459767 116/284 (41%)
TM4SF9_like_LEL 115..235 CDD:239412 65/161 (40%)

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