DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp26A and tspan36

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001002748.1 Gene:tspan36 / 437021 ZFINID:ZDB-GENE-040718-248 Length:243 Species:Danio rerio


Alignment Length:296 Identity:64/296 - (21%)
Similarity:115/296 - (38%) Gaps:73/296 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KYLLFASNVILWLSALLVLSVGIWAWSEKGMFRN-IARLHFIALDPAFVLIILGGVTFLLGFMGS 83
            |.:|...::|.|.:...:..||.:.......|.: ::..|  .|.||.::|.:..|.|::||:|.
Zfish     9 KTILLLLSLIFWAAGAALAYVGSYVIKSYNNFEDFMSDRH--TLIPAAIIIGVAVVMFIIGFVGC 71

  Fly    84 VGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYREDADQQNL 148
            ...|||:...||.:.|.:.::..||:  .|..|.:..:|.|:....:.:......|.....:.:.
Zfish    72 CATLRESKVGLGLFLIIIMLIFAAEV--TAFVFGIIYRGRIRGDLEKSMNDVFLKYDGLNSETHA 134

  Fly   149 IDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQEVIKNKQCGYDVRK 213
            :|::|.. |:|||:....||...::|        ::....||.|||:      ....||...:.:
Zfish   135 VDYLQSQ-LECCGVKNQTDWTLTSWF--------AQHNNTVPQSCCK------ANMTQCTGQLSQ 184

  Fly   214 EGYPVDRNIHERGCLRAGEDWLEAHLISVA--IGCVALLVLQGMELSKIIYEKGCVQAGEEWMEH 276
            ...     ::.:||        ||.|..|.  :...|:||:.|.                     
Zfish   185 PDL-----LNTQGC--------EAKLEQVLQDVLSYAMLVILGF--------------------- 215

  Fly   277 NLIIISATVIVVMFFQILGICFAQNLRADIYTQKSK 312
                     .::.||.:|.:|        :.|.|||
Zfish   216 ---------AIIKFFGMLSVC--------VITCKSK 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 42/174 (24%)
TM4SF9_like_LEL 118..239 CDD:239412 23/120 (19%)
tspan36NP_001002748.1 Tetraspanin 8..231 CDD:459767 60/291 (21%)
TM4SF8_like_LEL 103..206 CDD:239416 25/130 (19%)

Return to query results.
Submit another query.