DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and tspan7

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_989350.1 Gene:tspan7 / 394976 XenbaseID:XB-GENE-941774 Length:249 Species:Xenopus tropicalis


Alignment Length:307 Identity:68/307 - (22%)
Similarity:128/307 - (41%) Gaps:73/307 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAFVLIILGG 73
            |.||..:..|||.||...:.:.|::.:::|:||:|.....|.:  |:.:...:.:..:|||..|.
 Frog     5 RMETKPVITCLKTLLIIYSFVFWITGVILLAVGVWGKLTLGTY--ISLIAENSTNAPYVLIGTGT 67

  Fly    74 VTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRH 138
            ...:.|..|.....|.:..:|..||:|||::.:||:......||.:.:  |||.........|::
 Frog    68 TIIVFGLFGCFATCRGSPWMLKLYAMFLSLVFLAELIAGISGFVFRHE--IKDTFLRTYTEAIQN 130

  Fly   139 YREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRR----RPQ 199
            |..:.::...:|.:|.. |:|||:....:|.::.|::..          |.|.|||..    .||
 Frog   131 YNGNDERSQAVDDVQRS-LRCCGVQYYTNWTTSLYWHDH----------GFPSSCCANTSDCNPQ 184

  Fly   200 EVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYEK 264
            ::                  ||:                               .:..:| :.::
 Frog   185 DL------------------RNM-------------------------------TINFTK-VNQR 199

  Fly   265 GCVQAGEEWMEHNLIIISATVIVVMFFQILGI----CFAQNLRADIY 307
            ||.:....:||.|:.||:.....:.|.|::|:    |.::.:.|:.|
 Frog   200 GCYELVTSFMETNMGIIAGVAFGIAFSQLIGMLLACCLSRFITANQY 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 44/174 (25%)
TM4SF9_like_LEL 118..239 CDD:239412 22/124 (18%)
tspan7NP_989350.1 Tetraspanin 15..239 CDD:459767 62/288 (22%)
TM4SF2_6_like_LEL 110..213 CDD:239414 29/165 (18%)

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