DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and cd81

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_989271.1 Gene:cd81 / 394885 XenbaseID:XB-GENE-946220 Length:237 Species:Xenopus tropicalis


Alignment Length:161 Identity:45/161 - (27%)
Similarity:77/161 - (47%) Gaps:26/161 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CLKYLLFASNVILWLSALLVLSVGIW----AWSEKGMFRNIARLH-----FIALDPAFVLIILGG 73
            |:|||||..|.|.||:..::|.|.:|    ..:...:|:.....|     :|.:   :::|.:|.
 Frog     9 CIKYLLFVFNFIFWLAGGVILGVALWLRHDPQTSNLLFQQFEDKHAPGTFYIGV---YIIIAVGA 70

  Fly    74 VTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRH 138
            |...:||:|..||::|:.||||.:...|.:|...|:......||      .:||.::.::.|...
 Frog    71 VMMFVGFLGCYGAIQESQCLLGTFFACLVILFACEVAAGIWGFV------NRDQVSKEMRLFYSE 129

  Fly   139 YREDA------DQQNLIDWIQ--EDWLQCCG 161
            ..:.|      .||..:..::  .:.|||||
 Frog   130 VYQHATTGTKEQQQKALPVLKAFHETLQCCG 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 44/160 (28%)
TM4SF9_like_LEL 118..239 CDD:239412 11/52 (21%)
cd81NP_989271.1 Tetraspanin 10..229 CDD:459767 44/160 (28%)

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