DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and lbm

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001260757.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster


Alignment Length:259 Identity:54/259 - (20%)
Similarity:89/259 - (34%) Gaps:88/259 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ISCCLKYLLFASNVILWLSALL-VLSVGIWAWSEKGMFRNIARLHFIALD-----PAFVLIILGG 73
            :.|....:..||.|   |:|:| .|:.|...|              ||.:     ..||:.....
  Fly     1 MGCATTSVKIASIV---LNAVLGFLAAGAIGW--------------IAYNADTETEEFVIAAYIA 48

  Fly    74 VTFLLGF--MGSVGALRENTCLLGAYAIFLSVLLIAEI-GFCAVAFVLKDKGWIKDQATEGLKAF 135
            .:.:|.|  :|...|:||:..|....|:||.:|.|.:| ..|........|..            
  Fly    49 CSLILVFALLGIFAAIRESVVLTATSAVFLLILAILQIVSTCLFLHEFDVKSG------------ 101

  Fly   136 IRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSC---CRRR 197
             |...|.|.|.|.:|.:|:.. :|||....:|     |.:.|.:         :|.||   .::.
  Fly   102 -RDMVEVAWQANNMDSLQQKH-ECCGQSSAQD-----YIHLSLL---------IPPSCYADLQQT 150

  Fly   198 PQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAH----------LISVAIGCVALLV 251
            |.                     :::..||:...:.:.|:.          |::..:.|.||.|
  Fly   151 PD---------------------HLYLDGCIEKVQSFYESDKLRFIIVSWVLVAFELICFALAV 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 53/256 (21%)
DUF2207 <65..157 CDD:303056 24/94 (26%)
TM4SF9_like_LEL 118..239 CDD:239412 21/133 (16%)
lbmNP_001260757.1 Tetraspannin 8..198 CDD:278750 53/252 (21%)
tetraspanin_LEL <109..169 CDD:239401 16/95 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442895
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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