DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tsp42Ee

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001260753.1 Gene:Tsp42Ee / 35614 FlyBaseID:FBgn0029506 Length:228 Species:Drosophila melanogaster


Alignment Length:189 Identity:50/189 - (26%)
Similarity:81/189 - (42%) Gaps:44/189 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHF--IALDPAFVLIILGGVTFLLGFM 81
            :||:||..|.|:.:..:|.:..|:......|:.....::.|  .||.| .:||.||.:...:.|:
  Fly     8 VKYILFIFNTIVSVIGILGIVYGVLILKSIGVVEVNGQVGFPIQALMP-IILISLGSIVVFISFL 71

  Fly    82 GSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDK-----------GWIKDQATEGLKAF 135
            |..||:||:.|:..:||.||.:|||.::.|..:.|..:::           .|..:...:|    
  Fly    72 GCCGAIRESVCMTMSYATFLLILLILQLTFVVLLFTHREEFENAMGNVIENAWNSEHTYKG---- 132

  Fly   136 IRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCC 194
                       .:.|.||:. |.|||.....|:            ||..:.  ||.|||
  Fly   133 -----------GVFDTIQKS-LHCCGSSSALDY------------IGKGDL--VPPSCC 165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 50/189 (26%)
DUF2207 <65..157 CDD:303056 25/102 (25%)
TM4SF9_like_LEL 118..239 CDD:239412 17/88 (19%)
Tsp42EeNP_001260753.1 Tetraspannin 8..219 CDD:278750 50/189 (26%)
tetraspanin_LEL 106..187 CDD:239401 18/90 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442903
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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