DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp26A and Tsp29Fa

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster


Alignment Length:246 Identity:60/246 - (24%)
Similarity:117/246 - (47%) Gaps:43/246 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAFVLIILGGVTFLLGFMGS 83
            :||.||..|:|..::.:::::||....:....::......|.:: |.| ||::|....::.|.|.
  Fly    11 VKYTLFGFNLIFLITGIILIAVGAGVGAVYTGYKLFLAGKFFSI-PTF-LIVIGSFIIIISFFGC 73

  Fly    84 VGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYREDADQQN- 147
            .|||:||.||:.::::.|:::.|.|:......:||      ::.|::.:|..:.:...:.:..| 
  Fly    74 WGALKENYCLVLSFSVMLAIIFILELAAGISGYVL------RNDASDLIKTSLTYSLNEYNSINP 132

  Fly   148 -----LIDWIQEDWLQCCGIDGPKDW-----DSNNYFNCSSIAIGSREACGVPFSCCRRRPQEVI 202
                 |.|.||::: :|||:....||     :.:...:|.::.:|   |.|. |:|         
  Fly   133 NATTKLWDDIQDEF-ECCGVTSYNDWITAFPNGDLPISCCNVHVG---AVGT-FTC--------- 183

  Fly   203 KNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQ 253
            .|.|...        .||  |:.|||.....::.||.:|:....|.:.:||
  Fly   184 NNAQSSV--------ADR--HKVGCLDGFSGYISAHAVSLGAAGVVIAILQ 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 58/244 (24%)
DUF2207 <65..157 CDD:303056 25/97 (26%)
TM4SF9_like_LEL 118..239 CDD:239412 28/131 (21%)
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 60/246 (24%)
tetraspanin_LEL 106..210 CDD:239401 29/133 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45442924
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19282
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.