DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Tspan17

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_006253692.1 Gene:Tspan17 / 306771 RGDID:1311167 Length:281 Species:Rattus norvegicus


Alignment Length:314 Identity:126/314 - (40%)
Similarity:178/314 - (56%) Gaps:45/314 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAAVRKFRRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFI-ALDP 64
            ||...::|  :..|:.||.||.||..|::.|:...|.|::|:|||.|||:..||:.|..: .|||
  Rat     1 MPGKHQQF--QDPEVGCCGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISGLTDLGGLDP 63

  Fly    65 AFVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQAT 129
            .::.:::||:..:|||.|.:|||||||.||..:::||.::...|:....:|||.||  ||:||..
  Rat    64 VWLFVVIGGIMSVLGFAGCIGALRENTFLLKFFSVFLGLIFFLELAAGILAFVFKD--WIRDQLN 126

  Fly   130 EGLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCC 194
            ..:...::.||:|.|.|||||:.||.| .|||..||.||:.|.||||:.:. .|||.||||||||
  Rat   127 LFINNNVKAYRDDIDLQNLIDFAQEYW-SCCGARGPNDWNLNIYFNCTDLN-PSRERCGVPFSCC 189

  Fly   195 RRRPQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSK 259
            .|.|.|.:.|.|||||:|                                     |.|: :|...
  Rat   190 VRDPAEDVLNTQCGYDIR-------------------------------------LKLE-LEQQG 216

  Fly   260 IIYEKGCVQAGEEWMEHNLIIISATVIVVMFFQILGICFAQNLRADIYTQKSKW 313
            .||.||||...|:|::.|||:::..::.:...||.|||.||||.:||...|:.|
  Rat   217 SIYTKGCVGQFEKWLQDNLIVVAGVLVAIALLQICGICLAQNLVSDIEAVKANW 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 95/235 (40%)
DUF2207 <65..157 CDD:303056 38/91 (42%)
TM4SF9_like_LEL 118..239 CDD:239412 51/120 (43%)
Tspan17XP_006253692.1 TM4SF9_like_LEL 115..235 CDD:239412 64/161 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 214 1.000 Domainoid score I2650
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41762
Inparanoid 1 1.050 235 1.000 Inparanoid score I3319
OMA 1 1.010 - - QHG48585
OrthoDB 1 1.010 - - D1180379at2759
OrthoFinder 1 1.000 - - FOG0001766
OrthoInspector 1 1.000 - - otm46048
orthoMCL 1 0.900 - - OOG6_106312
Panther 1 1.100 - - O PTHR19282
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X349
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.880

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