Protein Alignment Tsp26A and Tspan1

DIOPT Version :10

• Sequence 1: NP_001097093.1
• Gene: Tsp26A / 33838
• FlyBaseID: FBgn0031760
• Length: 314
• Species: Drosophila melanogaster
• Sequence 2: NP_001004236.1
• Gene: Tspan1 / 298436
• RGDID: 1303308
• Length: 241
• Species: Rattus norvegicus
• Alignment Length: 268
• Identity: 64/268 - (23%)
• Similarity: 107/268 - (39%)
• Gaps: 61/268 - (22%)

  Fly    19 LKYLLFASNVILWLSALLVLSVGIWAWSEKG-----MFRNIARLHFIALDPAFVLIILGGVTFLL 78
            :|.::...|::::|....:|:||||. |..|     .|.:::......::..:.||..|.|.|:|
  Rat     7 IKVMMILFNLLIFLCGAALLAVGIWV-SVDGTSFLKAFGSLSSSAMQFVNVGYFLIAAGAVLFIL 70

  Fly    79 GFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYREDA 143
            ||:|..||..||.|:|..:...|.::.||||....||.|.       ....|....|:
  Rat    71 GFLGCYGAHSENKCVLMMFFSILLIIFIAEIAGAVVALVY-------TTMAEQFLTFL------- 121

  Fly   144 DQQNLIDWIQEDW----------------LQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFS 192
                ::..|::|:                |.|||.        |||.:.:|...........||.
  Rat   122 ----VVPAIEKDYGYQTEFTQVWNSTMEGLHCCGF--------NNYTDFNSSRFVKENKVFPPFC 174

  Fly   193 CCRRRPQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLIS---VAIGCVALLVLQG 254
            |........:  :.|..|..|       :::.:||.:.....:..:.::   ||:| ||.|.|..
  Rat   175 CANNTDSHTV--EPCTEDKAK-------SMNVQGCFKQILQKIRTNAVTVGGVAVG-VAALELAA 229

  Fly   255 MELSKIIY 262
            |.:|..:|
  Rat   230 MVVSMYLY 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Tsp26A	NP_001097093.1	Tetraspanin	19..194	CDD:459767	48/195 (25%)
		TM4SF9_like_LEL	118..239	CDD:239412	20/136 (15%)
Tspan1	NP_001004236.1	Tetraspanin	7..>151	CDD:459767	40/162 (25%)
		uroplakin_I_like_LEL	106..211	CDD:239409	23/139 (17%)