DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Cd63

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_063119178.1 Gene:Cd63 / 29186 RGDID:62080 Length:304 Species:Rattus norvegicus


Alignment Length:307 Identity:70/307 - (22%)
Similarity:130/307 - (42%) Gaps:77/307 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAF------------VLII 70
            |:|:||:...:.....|:.::::|:...              :.|..|.            |:|.
  Rat    33 CVKFLLYVLLLAFCACAVGLIAIGVAVQ--------------VVLKQAITHETTAGSLLPVVIIA 83

  Fly    71 LGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAF 135
            :|...||:.|:|..||.:||.||:..:|||||::::.|:......:|.:|:  :|.:.::..:..
  Rat    84 VGAFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAVAIAGYVFRDQ--VKSEFSKSFQKQ 146

  Fly   136 IRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQE 200
            :::|..|.....::|.:|:: .:|||.....||:          .|.......||.|||      
  Rat   147 MQNYLTDNKTATILDKLQKE-NKCCGASNYTDWE----------RIPGMAKDRVPDSCC------ 194

  Fly   201 VIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYEKG 265
            :.....||.|.:      :..||.:||:.....||..:::.||   .|.|.:..:|:...:   |
  Rat   195 INITVGCGNDFK------ESTIHTQGCVETIAAWLRKNVLLVA---GAALGIAFVEVRNAV---G 247

  Fly   266 CVQAG--------------------EEWMEHNLIIISATVIVVMFFQ 292
            |.:||                    .||:..||..:..|:|.::.|:
  Rat   248 CGRAGLDQLRASGEQEALTGLGTVAVEWVWGNLPCLLPTLISILPFR 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 42/186 (23%)
TM4SF9_like_LEL 118..239 CDD:239412 26/120 (22%)
Cd63XP_063119178.1 None

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