DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and tsp-2

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_498803.1 Gene:tsp-2 / 259752 WormBaseID:WBGene00006628 Length:234 Species:Caenorhabditis elegans


Alignment Length:193 Identity:42/193 - (21%)
Similarity:75/193 - (38%) Gaps:49/193 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TSEISCCLKYLLFASNVILWLSALLVLSVGIWAW----SEKGMFRNIARLHF-------IALD-- 63
            ||.|:...:..:|..::     |:|..|:|:..|    .:|...|::..:.|       :|.|  
 Worm     2 TSRIAFISRITIFCLSL-----AMLFCSIGLDIWGSLMEDKSYERDLKDVVFNYNSSQPLADDKF 61

  Fly    64 -----------PAFVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFV 117
                       ..:.|.|:.|.   |..:|.:||:.:...:|....:.:.:..|.|:| .::|. 
 Worm    62 DMRSWIYSVYWSIYGLCIIAGP---LSIIGLIGAISQKKPVLATCLVLIVIFFIMELG-GSIAL- 121

  Fly   118 LKDKGWIKDQATEGLKAFIRHYREDADQQNL---IDWIQEDWLQCCGI-DGPKDWDSNNYFNC 176
                 |.|   ...|::.:..:..|....|.   |..||..: .|||: ||  .|...|..:|
 Worm   122 -----WSK---RGSLRSLLYRFANDIYLTNSVFDISIIQNTY-NCCGVQDG--QWKCPNAPSC 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 39/187 (21%)
DUF2207 <65..157 CDD:303056 20/94 (21%)
TM4SF9_like_LEL 118..239 CDD:239412 16/63 (25%)
tsp-2NP_498803.1 Tetraspannin <84..203 CDD:278750 25/103 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3882
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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