DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and Cd9

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_063141640.1 Gene:Cd9 / 24936 RGDID:2318 Length:249 Species:Rattus norvegicus


Alignment Length:268 Identity:67/268 - (25%)
Similarity:106/268 - (39%) Gaps:66/268 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SCCLKYLLFASNVILWLSALLVLSVGIWAWSE---KGMFRNIARLHFIALDPAFVLIILGGVTFL 77
            |.|:|||||..|.|.||:.:.||::|:|...:   |.:|..... |.......::||..|.:..|
  Rat     7 SKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETN-HSSFYTGVYILIGAGALMML 70

  Fly    78 LGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIRHYRE- 141
            :||:|..||::|:.|:||.:..||.|:...||......:..||         |.:|.....|:: 
  Rat    71 VGFLGCCGAVQESQCMLGLFFGFLLVIFAIEIAAAVWGYTHKD---------EVIKELQEFYKDT 126

  Fly   142 -------DADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQ 199
                   |..|:..:..|... |.||||.|..:...::.                   |.:::..
  Rat   127 YQKLRNKDEPQRETLKAIHMA-LNCCGIAGGVEQFISDI-------------------CPKKQVL 171

  Fly   200 EVIKNKQCGYDVRKEGYP--VDRNIHERGCLRAGEDWLEAHLI-SVAIGCVALLVLQGMELSKII 261
            |..:.|.|         |  :|...|.:           .|:| :|.||...::|.......|.:
  Rat   172 ESFQVKSC---------PDAIDEVFHSK-----------FHIIGAVGIGIAVVMVSGRWSRGKTL 216

  Fly   262 YEKGCVQA 269
            .  .|.||
  Rat   217 V--SCAQA 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 48/185 (26%)
TM4SF9_like_LEL 118..239 CDD:239412 21/130 (16%)
Cd9XP_063141640.1 None

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