DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp26A and Tspan33

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_666285.1 Gene:Tspan33 / 232670 MGIID:1919012 Length:283 Species:Mus musculus


Alignment Length:325 Identity:101/325 - (31%)
Similarity:166/325 - (51%) Gaps:59/325 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAAVRKFRRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPA 65
            :|||   :..|.|.:|..:|||||..|::.|:.::::::||::|   :.|....|.|..:|:|||
Mouse     7 VPAA---YGDEFSFVSPLVKYLLFFFNMLFWVISMVMVAVGVYA---RLMKHAEAALACLAVDPA 65

  Fly    66 FVLIILGGVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATE 130
            .:||::|.:.|||.|.|.:|:||||.|||..:::.|:::.:.::....:.||..||.  :.:.:|
Mouse    66 ILLIVVGVLMFLLTFCGCIGSLRENICLLQTFSLCLTIVFLLQLAAGILGFVFSDKA--RGKVSE 128

  Fly   131 GLKAFIRHYREDADQQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCR 195
            .:...|.|||:|.|.|||||:.|:.: .|||....:||..|.|||||. ...|||.|.||:|||.
Mouse   129 IINNAIVHYRDDLDLQNLIDFGQKKF-SCCGGISYRDWSQNMYFNCSE-DNPSRERCSVPYSCCL 191

  Fly   196 RRPQEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKI 260
            ..|.:.:.|..||..::                  ..|:|||                    ||:
Mouse   192 PTPNQAVINTMCGQGMQ------------------ALDYLEA--------------------SKV 218

  Fly   261 IYEKGCVQAGEEWMEHNLIIISATVIVVMFFQILGICFAQ--------NLRADIYTQKSK---WH 314
            ||..||:.....|:..||.::....:.:...|::||..:|        .::..:|.|:.:   |:
Mouse   219 IYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGILLSQVLVNQIKDQIKLQLYNQQHRADPWY 283

  Fly   315  314
            Mouse   284  283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 69/174 (40%)
TM4SF9_like_LEL 118..239 CDD:239412 43/120 (36%)
Tspan33NP_666285.1 Tetraspanin 22..262 CDD:459767 92/284 (32%)
penumbra_like_LEL 116..236 CDD:239411 52/161 (32%)

Return to query results.
Submit another query.