DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tsp26A and tsp-15

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_492404.1 Gene:tsp-15 / 192065 WormBaseID:WBGene00006641 Length:258 Species:Caenorhabditis elegans


Alignment Length:276 Identity:57/276 - (20%)
Similarity:110/276 - (39%) Gaps:68/276 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAFVLIILGGVTFLLGFMGS 83
            :|:....:.:|..|.::..:..|||..:.:..:..:.. ..:.:|...:|:|:..::.|...:..
 Worm    16 IKFSYIVTALISILFSISCICYGIWLLARRSQYAELVS-PSLYVDVGRILVIISILSILNYLICF 79

  Fly    84 VGALRENTCLLGAYA---IFLSVLLIAEIGFC-AVAFVLKDKGWIKDQATE----GLKAF--IRH 138
            ....:|..|.:.:.|   |.::|:||  ||.| .:.|        :||.|.    .||..  :|.
 Worm    80 YAIFKEMRCFVTSCAVASIVIAVMLI--IGGCIGLNF--------RDQLTHYTPLNLKMLTSLRE 134

  Fly   139 YREDADQQNLIDWIQEDW------LQCCGIDGPKD---WDSNNYF---NCSSIAIGSREACGVPF 191
            .....|.:.    |.|.|      .:|||::|..:   |.::.::   ....:.|        |.
 Worm   135 LYGTHDMKG----ITESWDALQSNFKCCGVNGTDNAQIWKTSKWYMHQRAPKLLI--------PE 187

  Fly   192 SCCRRRPQEVIKNKQCGYDVRKEGYPVDRN----IHERGCLRAGEDWLEAHLISVAIG-CVALLV 251
            |||  .|.|:   ::|      ...|.|::    .:...|....::.| .|:::||.. |:...:
 Worm   188 SCC--IPSEI---ERC------RSNPFDQDAPPPYYTSTCYEPLQNDL-LHVMNVASWLCITNAI 240

  Fly   252 LQ------GMELSKII 261
            :|      |...||:|
 Worm   241 VQIIPSVAGCWYSKLI 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 39/196 (20%)
TM4SF9_like_LEL 118..239 CDD:239412 27/142 (19%)
tsp-15NP_492404.1 Tetraspanin 16..>159 CDD:459767 32/157 (20%)
uroplakin_I_like_LEL 110..228 CDD:239409 29/149 (19%)

Return to query results.
Submit another query.