DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and tsp-13

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_741692.1 Gene:tsp-13 / 189737 WormBaseID:WBGene00006639 Length:321 Species:Caenorhabditis elegans


Alignment Length:293 Identity:63/293 - (21%)
Similarity:116/293 - (39%) Gaps:97/293 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KYLLFASNVILWLSALLVLSVGIWAWSEKGMFRN-IARLHFIALDPAF-----------VLIILG 72
            ||.:|.:|::..:...|:|::|:|..:: ..||| |:..:..|:..||           ::|:||
 Worm    58 KYGIFTANIVFLIVGGLLLAMGVWLRTD-SRFRNFISERYRQAVQEAFWEAPTLFAFSYIIIVLG 121

  Fly    73 GVTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGLKAFIR 137
            .|..::..:|..|....:...|..|::.:.:||:|.:. |.: ::|..|..:..:.::.|...::
 Worm   122 AVMMVVAMLGCCGITGRSRPFLIIYSMVVFLLLVATLS-CGI-YLLYKKDGLDVELSDALNYMVQ 184

  Fly   138 HYREDAD-QQNLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQEV 201
            ||.:... .|..:|.:|..: :|||..|           ||...:..::   :|.||        
 Worm   185 HYYQGPGVVQESLDHLQTAF-RCCGNAG-----------CSDFRVFRQD---IPRSC-------- 226

  Fly   202 IKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYEKGC 266
                    |:|.:|      .|.|            .:|::.||                     
 Worm   227 --------DIRCDG------CHFR------------IMIALRIG--------------------- 244

  Fly   267 VQAGEEWMEHNLIIISATVIVVMFFQILGICFA 299
                   ....||:.||.|:.    |:|.||||
 Worm   245 -------FSVTLIVFSAVVLC----QVLTICFA 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 43/186 (23%)
TM4SF9_like_LEL 118..239 CDD:239412 22/121 (18%)
tsp-13NP_741692.1 Tetraspanin 58..271 CDD:459767 63/293 (22%)

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