DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and tsp-20

DIOPT Version :10

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:NP_510014.1 Gene:tsp-20 / 181376 WormBaseID:WBGene00006646 Length:279 Species:Caenorhabditis elegans


Alignment Length:263 Identity:62/263 - (23%)
Similarity:108/263 - (41%) Gaps:29/263 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RRETSEISCCLKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAFVLIILGG 73
            ||..|...||.|..||.| .:|.:..:|.|::.||.:..:|....:.:.||. :...::.:..|.
 Worm    15 RRSGSCSGCCSKCQLFIS-YLLVIVGILFLALAIWLYIFRGDLIPLIQSHFY-VKCIYLAVGCGV 77

  Fly    74 VTFLLGFMGSVGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDKGWIKDQATEGL-KAFIR 137
            ...::||:  |.:...|.|.|..|.:.|...:|.|  .|.:.|........:.:....| ...:.
 Worm    78 FNVIIGFL--VHSAVSNRCALVFYLLMLIFSMIME--GCLIYFTFSYHATYEQELNASLPNDILN 138

  Fly   138 HYREDADQQNLIDWIQEDWLQCCGIDGPKDWD----SNNYFNCSSIAIGSREACGVPFSCCRRRP 198
            :|..|.:....::::|.| .:|||.:...||.    .::|...:...:  :....:|.|||:...
 Worm   139 NYNLDPNIAKAVNYLQRD-SKCCGSNAFNDWPKPEVEDHYLPYAKTVV--QRVQYIPDSCCKSTH 200

  Fly   199 QEVIKNKQCGYDVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYE 263
            |    .|.|...      ....||..||||...::.:..:|..:.....|.|||   ..:.:|: 
 Worm   201 Q----RKGCALS------DSPNNIFYRGCLPFLKEEVYNNLNFLFTVTAASLVL---HFANLIF- 251

  Fly   264 KGC 266
             ||
 Worm   252 -GC 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspanin 19..194 CDD:459767 38/179 (21%)
TM4SF9_like_LEL 118..239 CDD:239412 24/125 (19%)
tsp-20NP_510014.1 Tetraspanin 25..257 CDD:459767 57/253 (23%)
CD151_like_LEL 118..231 CDD:239408 24/125 (19%)

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