DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp26A and tspan10

DIOPT Version :9

Sequence 1:NP_001097093.1 Gene:Tsp26A / 33838 FlyBaseID:FBgn0031760 Length:314 Species:Drosophila melanogaster
Sequence 2:XP_031750424.1 Gene:tspan10 / 101731851 XenbaseID:XB-GENE-990323 Length:358 Species:Xenopus tropicalis


Alignment Length:292 Identity:75/292 - (25%)
Similarity:135/292 - (46%) Gaps:52/292 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LKYLLFASNVILWLSALLVLSVGIWAWSEKGMFRNIARLHFIALDPAFVLIILGGVTFLLGFMGS 83
            :|||:|.:|.:..:....:...|:|...:|....: .|:.::..||....:::|.:...|...|.
 Frog    90 IKYLMFFTNFVFSILGFALFGFGVWGLVDKQSLIS-DRIGYLGTDPMLSFVMVGLIVSFLSVSGC 153

  Fly    84 VGALRENTCLLGAYAIFLSVLLIAEIGFCAVAFVLKDK--GWIKDQATEGLKAFIRHYREDADQQ 146
            :|.:|||..||..:::.:|:|::.::....:.|..||:  |.:|:    .|...:..|.:|:|.:
 Frog   154 LGFIRENIYLLRCFSLGISILMVTQLLSAIIIFAFKDQIIGSVKN----SLLVALSRYHDDSDLK 214

  Fly   147 NLIDWIQEDWLQCCGIDGPKDWDSNNYFNCSSIAIGSREACGVPFSCCRRRPQE--VIKNKQCGY 209
            .::|.:|.. ::|||:....||..:.||||||..:   .|||||:||| ..|.|  .:.|.|||.
 Frog   215 FIMDEVQLG-MECCGVQSYTDWAVSLYFNCSSPGV---YACGVPYSCC-IDPFENGTVINSQCGV 274

  Fly   210 DVRKEGYPVDRNIHERGCLRAGEDWLEAHLISVAIGCVALLVLQGMELSKIIYEKGCVQAGEEWM 274
                            |.::.||                  .:.|    .:|:..|||.....|:
 Frog   275 ----------------GAMQMGE------------------TMAG----SVIFLGGCVPQMILWL 301

  Fly   275 EHNLIIISATVIVVMFFQILGICFAQNLRADI 306
            :.....|:|..::||..|::.:..||.:..:|
 Frog   302 QRKFWDIAAVFLLVMVIQLVCVVCAQRMLGEI 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tsp26ANP_001097093.1 Tetraspannin 18..253 CDD:278750 61/237 (26%)
DUF2207 <65..157 CDD:303056 22/93 (24%)
TM4SF9_like_LEL 118..239 CDD:239412 38/124 (31%)
tspan10XP_031750424.1 Tetraspannin 90..326 CDD:395265 72/283 (25%)
oculospanin_like_LEL 186..303 CDD:239420 45/163 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D574036at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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