Protein Alignment Kdm5 and AT2G38950

DIOPT Version :10

• Sequence 1: NP_523486.1
• Gene: Kdm5 / 33837
• FlyBaseID: FBgn0031759
• Length: 1838
• Species: Drosophila melanogaster
• Sequence 2: NP_181429.2
• Gene: AT2G38950 / 818480
• AraportID: AT2G38950
• Length: 708
• Species: Arabidopsis thaliana
• Alignment Length: 752
• Identity: 199/752 - (26%)
• Similarity: 304/752 - (40%)
• Gaps: 191/752 - (25%)

  Fly   319 VLGPTPTSSGSGSTPVKLED--GGGTDYK---------------AHEIPTRQQIAPPNETNTRRS 366
            ||...|....|..:..:.|.  |.|||.|               .|.||:.:.:. |.:|..||.
plant    31 VLRNVPRDKESPRSVSRQEQTTGFGTDDKDSCNMFLKSRPWIVHGHTIPSSEALR-PKKTEVRRR 94

  Fly   367 KRFGNSNASCGLSGVTPTTK--PSAGVFVKTETKEEFKRDLLSSFNAVNSGGSPLATGTTANTRG 429
            :....|.           ||  ..|.||..||  ||| ||.||..:::.....|..
plant    95 RPLKVSE-----------TKVLEEAPVFNPTE--EEF-RDTLSYISSLRDRAEPYG--------- 136

  Fly   430 ASQKKGGEPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPR 494
                                   ||                      |::||      ..|. |.
plant   137 -----------------------IC----------------------CVVPP------PSWK-PP 149

  Fly   495 CVVEE-------VSKPQ-EAFGFEQAERE---------------------------YTLQQFGQM 524
            |:::|       ...|| :.||.:...|:                           |||:.|...
plant   150 CLLKEKQIWEASTFFPQVQLFGIQTENRKIKKEVDADSNDAASEGVQLCRVERGPGYTLKSFKNF 214

  Fly   525 ADQFKQEYF---------------RKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHG 574
            ||.:|:.:|               .||..|:..: :|:|:.:||.|...::.|.||.||.|...|
plant   215 ADTYKKSHFGMKDEVLGSENSSPSLKPNELIVAD-IEKEYRQIVESPLIEIGVLYGNDLDTATFG 278

  Fly   575 SGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNE 639
            ||||..:     |.:.....|.||||:...|..|:|.  ..|...:..|.:.||||.::..|.:|
plant   279 SGFPLSA-----PSESSKYSSGWNLNSTAKLPGSLLS--LEDCESVCVPRLSVGMCLSSQFWKSE 336

  Fly   640 DHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRV 704
            ....||:.|||.|.|:.||.|.|....:|:..||....|:...||...|..|.:|:|..|....:
plant   337 KERLYSLCYLHVGAPRVWYSVAGCHRSKFKAAMKSFILEMSGEQPKKSHNPVMMMSPYQLSVEGI 401

  Fly   705 PVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDE 769
            ||.|..||.|::||.||.:|::.|:.|:|..|..||||.|||..|...|.....:.:..:.|:|:
plant   402 PVTRCVQHPGQYVIIFPGSYYSAFDCGFNCLEKANFAPLDWLPHGDIAVQVNQEMSKTSLISYDK 466

  Fly   770 LVCKMALEPAKL--TFGIA---TACYID----------MAEMVDTEKKLRKSLLEWGVTRAER-- 817
            |:...|.|..|.  .:|::   ||||..          .:.::.:..||.|:..|:.::..|.
plant   467 LLFSAAREAVKCLKEYGLSKKNTACYTRWNDSCGTDGLFSNIIKSRIKLEKNRREFLISSLESQR 531

  Fly   818 --RAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMP 880
              ::::.||  :|.|..|....:||||.|.|:.....||.|...||.|..::.:.:||||:||:.
plant   532 MDKSYDAVN--KRECCVCLGDLYLSAVNCSCSANRYSCLNHMRKLCACPCDRKSFLYRYTMDELN 594

  Fly   881 LMLQKLK-VKAHSFERWLSRCRDIVD---AHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAA 941
            |:::.|: .|..|..||..     :|   ..:|.:.:.:..::..||.: :..|.:  |.|.:.|
plant   595 LLVEALEGKKLSSMFRWAG-----IDQKFCASPATTSSKPEEDKGKETD-EVTPCN--ITRKDVA 651

  Fly   942 AVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTME 978
            |  ..|..|.::...:..:....|.|.:|   |.|:|
plant   652 A--GTKDQTRVKARSLADILNVKDGNNDA---KETLE 683

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Kdm5	NP_523486.1	JmjN	160..201	CDD:128818
		ARID_JARID	226..312	CDD:350628
		PHD1_Lid_like	450..495	CDD:277078	7/44 (16%)
		JmjC	624..740	CDD:396791	43/115 (37%)
		zf-C5HC2	830..882	CDD:460750	20/51 (39%)
		PLU-1	896..1231	CDD:462475	18/86 (21%)
		PHD2_KDM5A	1295..1351	CDD:277079
		PHD3_KDM5A_like	1755..1805	CDD:277083
AT2G38950	NP_181429.2	JmjN	107..148	CDD:128818	19/104 (18%)
		JmjC	321..437	CDD:396791	43/115 (37%)
		zf-C5HC2	544..594	CDD:460750	20/49 (41%)