Sequence 1: | NP_001245908.1 | Gene: | lid / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_181429.2 | Gene: | AT2G38950 / 818480 | AraportID: | AT2G38950 | Length: | 708 | Species: | Arabidopsis thaliana |
Alignment Length: | 752 | Identity: | 199/752 - (26%) |
---|---|---|---|
Similarity: | 304/752 - (40%) | Gaps: | 191/752 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 319 VLGPTPTSSGSGSTPVKLED--GGGTDYK---------------AHEIPTRQQIAPPNETNTRRS 366
Fly 367 KRFGNSNASCGLSGVTPTTK--PSAGVFVKTETKEEFKRDLLSSFNAVNSGGSPLATGTTANTRG 429
Fly 430 ASQKKGGEPPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPR 494
Fly 495 CVVEE-------VSKPQ-EAFGFEQAERE---------------------------YTLQQFGQM 524
Fly 525 ADQFKQEYF---------------RKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHG 574
Fly 575 SGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNE 639
Fly 640 DHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRV 704
Fly 705 PVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDE 769
Fly 770 LVCKMALEPAKL--TFGIA---TACYID----------MAEMVDTEKKLRKSLLEWGVTRAER-- 817
Fly 818 --RAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMP 880
Fly 881 LMLQKLK-VKAHSFERWLSRCRDIVD---AHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAA 941
Fly 942 AVEAEKCVTVIQQLGINKVRTRSDHNQEAAQYKLTME 978 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lid | NP_001245908.1 | JmjN | 160..201 | CDD:128818 | |
ARID | 227..312 | CDD:198082 | |||
PHD1_Lid_like | 450..495 | CDD:277078 | 7/44 (16%) | ||
JmjC | 624..740 | CDD:202224 | 43/115 (37%) | ||
zf-C5HC2 | 830..882 | CDD:280996 | 20/51 (39%) | ||
PLU-1 | 896..1229 | CDD:285609 | 18/86 (21%) | ||
PHD2_KDM5A | 1295..1351 | CDD:277079 | |||
PHD3_KDM5A_like | 1755..1805 | CDD:277083 | |||
AT2G38950 | NP_181429.2 | JmjN | 107..148 | CDD:128818 | 19/104 (18%) |
JmjC | 321..437 | CDD:202224 | 43/115 (37%) | ||
zf-C5HC2 | 544..596 | CDD:280996 | 20/51 (39%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 90 | 1.000 | Domainoid score | I2656 |
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.920 |