Sequence 1: | NP_001245908.1 | Gene: | lid / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036068.1 | Gene: | KDM5A / 5927 | HGNCID: | 9886 | Length: | 1690 | Species: | Homo sapiens |
Alignment Length: | 1825 | Identity: | 728/1825 - (39%) |
---|---|---|---|
Similarity: | 997/1825 - (54%) | Gaps: | 349/1825 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 155 FDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDKLRFVPRVQRL 219
Fly 220 NELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQTTKDRKWAKV 284
Fly 285 ANRMQYPSSKSVGATLKAHYERILHPFEVYTSG-KVLG-------------PTPTSSGSGSTPVK 335
Fly 336 LEDGGGTDYKAHEIPTRQQIAPPNETNTRRSKRFGNSNASCGLSGVTPTTKPSAGVFVKTETKEE 400
Fly 401 FKRDLLSSFNAVNSGGSPLATGTTANTRGAS---------------------QKKGGEPPALIVD 444
Fly 445 PLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGF 509
Fly 510 EQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHG 574
Fly 575 SGFPTKSS-LYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHN 638
Fly 639 EDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNR 703
Fly 704 VPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHD 768
Fly 769 ELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQEC 833
Fly 834 NTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKVKAHSFERWLS 898
Fly 899 RCRDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAVEAEKCVTVIQQLGINKVRTR 963
Fly 964 SDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERSESQLQLSLESLEES 1028
Fly 1029 ELETLINEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLLHIAAADLDPTD 1093
Fly 1094 PYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHELGEIEQFLKSASDINGQVPSHGLLKDALR 1158
Fly 1159 KAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELSRMQGHLNSAHQWKDNTACAFLKK 1223
Fly 1224 GTFYTLLEVLMPRSDAINI---------------------DSDLKP--RFQDDFLKEKNPAEIVA 1265
Fly 1266 SFKHAEEQELLDMRELRRQNMNKNPMRD-----MFCLCKSEFRNLMFNCQLCRDWFHEDCVPPPS 1325
Fly 1326 ATNQNGIVNGGSGPGTNRPKWLCPSCVRSKRPRLETILPLLVQLQQLPIRLPEDEALRCLAERAM 1390
Fly 1391 NWQDRARKALSSPDVSAA-------------------QEAIMAQQQQK--------------RRS 1422
Fly 1423 EGGAGVGNISSPRKPRRRGSLTKEASGSTESDADDD-------DDEDECRLR---IVEDNFSNDE 1477
Fly 1478 D----------------------------------------EPRTAP-ATSTVNSDLLKLLSDSE 1501
Fly 1502 IENLLDLMMEGDLLEVSLDETQELWRILE-TMPPT------LLQAEAMERVVQYMQRQRQQHTNP 1559
Fly 1560 LPTSGAEDSNDSLMVQNSPNSNSNSGGATGSASNSGRNKKRRSNDT------GGNSAVPRKKQST 1618
Fly 1619 PKQTPGKKGSAAAARKSDAKASPAASTTPGADADAE-NKQANGGNTNSSTGSGGGNSATTTPTPG 1682
Fly 1683 STHKKRKRTSTTATNNNNNNNNNSTNNSNSSTNLNSNTTSGQGAATGGNNATGGQKKHAQR---- 1743
Fly 1744 ----SQQAAQEDDEEE--CRAENCHKPTGREVDWVQCDGGCNEWFHMYCVGLNRSQIKPDDDYIC 1802
Fly 1803 IRCTK 1807 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lid | NP_001245908.1 | JmjN | 160..201 | CDD:128818 | 24/40 (60%) |
ARID | 227..312 | CDD:198082 | 53/84 (63%) | ||
PHD1_Lid_like | 450..495 | CDD:277078 | 29/44 (66%) | ||
JmjC | 624..740 | CDD:202224 | 93/115 (81%) | ||
zf-C5HC2 | 830..882 | CDD:280996 | 27/51 (53%) | ||
PLU-1 | 896..1229 | CDD:285609 | 105/332 (32%) | ||
PHD2_KDM5A | 1295..1351 | CDD:277079 | 22/55 (40%) | ||
PHD3_KDM5A_like | 1755..1805 | CDD:277083 | 27/51 (53%) | ||
KDM5A | NP_001036068.1 | JmjN | 18..59 | CDD:128818 | 24/40 (60%) |
ARID | 85..170 | CDD:198082 | 53/84 (63%) | ||
PHD1_KDM5A | 295..343 | CDD:277075 | 31/47 (66%) | ||
GSGFP motif. /evidence=ECO:0000250|UniProtKB:Q3UXZ9 | 419..423 | 3/3 (100%) | |||
JmjC | 470..586 | CDD:202224 | 93/115 (81%) | ||
zf-C5HC2 | 676..728 | CDD:280996 | 27/51 (53%) | ||
PLU-1 | 741..1070 | CDD:285609 | 105/333 (32%) | ||
PHD2_KDM5A | 1163..1215 | CDD:277079 | 22/55 (40%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1327..1348 | 8/27 (30%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1407..1433 | 3/25 (12%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1490..1509 | 6/57 (11%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1516..1543 | 8/47 (17%) | |||
PHD3_KDM5A | 1608..1659 | CDD:277156 | 27/51 (53%) | ||
Interaction with LMO2. /evidence=ECO:0000269|PubMed:9129143 | 1623..1690 | 24/39 (62%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165151680 | |
Domainoid | 1 | 1.000 | 221 | 1.000 | Domainoid score | I2615 |
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H3419 | |
Inparanoid | 1 | 1.050 | 1252 | 1.000 | Inparanoid score | I176 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S2454 |
OMA | 1 | 1.010 | - | - | QHG53001 | |
OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000761 | |
OrthoInspector | 1 | 1.000 | - | - | otm40656 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100617 | |
Panther | 1 | 1.100 | - | - | O | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R628 |
SonicParanoid | 1 | 1.000 | - | - | X397 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
17 | 16.750 |