Sequence 1: | NP_001245908.1 | Gene: | lid / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001077320.1 | Gene: | kdm4c / 570194 | ZFINID: | ZDB-GENE-070209-38 | Length: | 1482 | Species: | Danio rerio |
Alignment Length: | 1375 | Identity: | 288/1375 - (20%) |
---|---|---|---|
Similarity: | 465/1375 - (33%) | Gaps: | 451/1375 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 380 GVTPTTKPSAGVFVKTETKEEFKRDLLSSFNA----VNSGGSPLATGTTANTRGASQ---KKGGE 437
Fly 438 PPALIVDPLMKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGE-WLCPRCVVEEVS 501
Fly 502 KPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVEREFWR---IVSSIDEDVTVE 563
Fly 564 YGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVG 628
Fly 629 MCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPELFSSQPDLLHQLVTI 693
Fly 694 MNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSM 758
Fly 759 LRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAERRAFELV 823
Fly 824 NDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCGCAPEKHTLIYRYTLDEMPLMLQKLKV 888
Fly 889 KAHSFERWLSRCRDIVDAHTPTSVTLQELQELCKEAETKKFPSSLLIDRLNAAAVEAEKCVTVIQ 953
Fly 954 QLGINKVRTRSDHNQEAAQYKLTMEELELFVQEIDNLCCIIDEGASVRELLVLGKQFVERSESQL 1018
Fly 1019 QLSLESLEESELETLI-NEGSSLRIELQQLDLLQKRLKQCKWYKRSQGLRETSSKLTYQDVKNLL 1082
Fly 1083 HIAAADLDPTDPYVDKEMRKLQQIGADIEAWESQAAKYFRRLTQQHELGEIEQFLKSASDI---- 1143
Fly 1144 ------NGQVPSHGLLKDALRKAREWLRAVEQLQQNNHVTYCHTLEAMIERGLNIPIQLEELSRM 1202
Fly 1203 QGHLNSAHQ-----WKDNTAC---AFLKKGTFYTLLEVLMPRSDAIN-IDSDLK-------PRFQ 1251
Fly 1252 DDFLKEK-NPAEIVASFKHAEEQELLDMRELRRQNMNKNPMRD--MFCLCKS--------EFRNL 1305
Fly 1306 MFNC--QLCRDWFHEDCVPPPSATNQN--GIVNGGSGPGTN---RPKWLCPSCVRSKRPRLETIL 1363
Fly 1364 PLLVQLQQLPIRLPEDEALRCLAERAMNWQDRARKALSSPDVSAAQEAIMAQQQ--QKRRSEGGA 1426
Fly 1427 GVGNISSPRKPRRRGSLTKEASGSTES-----------------------------DADDDDD-- 1460
Fly 1461 ------EDECRLRIVEDNFSNDEDEPRTAPATST-VNSDLLKL-LSDSEI-ENL-LDLMMEGDLL 1515
Fly 1516 EVSLDETQELWRILETMPPTLLQAEAMERVVQYMQRQRQQHTNPLPTSGAEDSNDSLMVQNSPNS 1580
Fly 1581 NSNSGGATGSASNSGRNKKRRSN--DTG-GNSAVPRKKQSTPKQTPGKKGSAAAARKSDAKASPA 1642
Fly 1643 ASTTPGADAD 1652 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lid | NP_001245908.1 | JmjN | 160..201 | CDD:128818 | |
ARID | 227..312 | CDD:198082 | |||
PHD1_Lid_like | 450..495 | CDD:277078 | 6/45 (13%) | ||
JmjC | 624..740 | CDD:202224 | 50/115 (43%) | ||
zf-C5HC2 | 830..882 | CDD:280996 | 6/51 (12%) | ||
PLU-1 | 896..1229 | CDD:285609 | 56/351 (16%) | ||
PHD2_KDM5A | 1295..1351 | CDD:277079 | 16/70 (23%) | ||
PHD3_KDM5A_like | 1755..1805 | CDD:277083 | |||
kdm4c | NP_001077320.1 | JmjN | 16..57 | CDD:128818 | 13/53 (25%) |
JmjC | 177..293 | CDD:202224 | 50/115 (43%) | ||
PHD_SF | 1079..1176 | CDD:304600 | |||
ePHD_JMJD2C | 1185..1294 | CDD:277185 | |||
TUDOR | 1308..1364 | CDD:197660 | |||
TUDOR | 1366..1421 | CDD:197660 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170586200 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.840 |