Sequence 1: | NP_001245908.1 | Gene: | lid / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005167851.1 | Gene: | kdm6a / 569277 | ZFINID: | ZDB-GENE-081105-56 | Length: | 1452 | Species: | Danio rerio |
Alignment Length: | 1017 | Identity: | 200/1017 - (19%) |
---|---|---|---|
Similarity: | 319/1017 - (31%) | Gaps: | 343/1017 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 45 RNSTGNGTNSGSESVKKSNANDEPSTP-----VTPAGATGSHTHAPPGISPAVMERPMP------ 98
Fly 99 -------SVPMNHASSSVS-ASKKY--HNSCPHPTPTPAPTG---------HKKSVHTQPHSSNK 144
Fly 145 FDQGKNEEFHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKILPPATWSPPFAVDVDK 209
Fly 210 LRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERKALDLYTLHRIVQEEGGMEQ 274
Fly 275 T--TKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVYTSG-KVLGPTPTSSGSGSTPVKL 336
Fly 337 ---------EDGGGTDYKAHEIPTRQQIAPPNETNTRRSKRFGNSNAS--C-GLSGVTPTTKPSA 389
Fly 390 GVFVKTETKEEFKRDLLSSFNAVNSGGSPLATGTTANTRGASQKKGGEPPALIVDPLMKYICH-- 452
Fly 453 ----------------------IC---NRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLC 492
Fly 493 PRCVVEEVSKPQEAFGFEQAEREY--TLQQF----------------------GQMADQFKQEYF 533
Fly 534 RKPVHLV--------PTE-----MVEREFWRIVSSIDEDVTVEYG--------ADLHTMDHGSGF 577
Fly 578 PTKSSLYLLPGDQEYA-------------------ESSW-----NLNNLP-----LLEDSILGHI 613
Fly 614 NADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMKQAAPE 678
Fly 679 LF------SSQPDLLHQLVTIMNPNI--LMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQG-YNF 734
Fly 735 AEAVNFAPADWLKMGRECVNHYSM-LRRFCVFSHDELVCKMALEP-AKLTFGIATACYID---MA 794
Fly 795 EMVD-----TEKK---LRKSLLEWGVTRAERRAFELV-----NDDERH-CQECNTTCF-LSAVAC 844
Fly 845 ECNDKLIVCLRHYTVLC-GCAP------EKHTLIYRYTLDEM 879 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lid | NP_001245908.1 | JmjN | 160..201 | CDD:128818 | 3/40 (8%) |
ARID | 227..312 | CDD:198082 | 15/86 (17%) | ||
PHD1_Lid_like | 450..495 | CDD:277078 | 11/71 (15%) | ||
JmjC | 624..740 | CDD:202224 | 28/124 (23%) | ||
zf-C5HC2 | 830..882 | CDD:280996 | 15/58 (26%) | ||
PLU-1 | 896..1229 | CDD:285609 | |||
PHD2_KDM5A | 1295..1351 | CDD:277079 | |||
PHD3_KDM5A_like | 1755..1805 | CDD:277083 | |||
kdm6a | XP_005167851.1 | TPR | 74..332 | CDD:223533 | |
TPR repeat | 95..123 | CDD:276809 | |||
TPR repeat | 131..176 | CDD:276809 | |||
TPR repeat | 181..211 | CDD:276809 | |||
TPR repeat | 222..250 | CDD:276809 | |||
TPR repeat | 260..295 | CDD:276809 | |||
TPR_17 | 289..320 | CDD:290167 | |||
TPR_11 | 302..365 | CDD:290150 | |||
TPR repeat | 302..329 | CDD:276809 | |||
TPR repeat | 334..364 | CDD:276809 | |||
TPR_1 | 335..368 | CDD:278916 | |||
TPR repeat | 369..395 | CDD:276809 | |||
SSDP | 572..852 | CDD:282372 | 67/343 (20%) | ||
JmjC | 1149..1213 | CDD:214721 | 16/72 (22%) | ||
JmjC | 1183..1291 | CDD:202224 | 28/132 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |