DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm5 and KDM4E

DIOPT Version :10

Sequence 1:NP_523486.1 Gene:Kdm5 / 33837 FlyBaseID:FBgn0031759 Length:1838 Species:Drosophila melanogaster
Sequence 2:NP_001155102.1 Gene:KDM4E / 390245 HGNCID:37098 Length:506 Species:Homo sapiens


Alignment Length:351 Identity:108/351 - (30%)
Similarity:159/351 - (45%) Gaps:48/351 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 IPKGEWLCPRCV-----------VEEVSKPQEAFGFEQAEREYTLQQFGQMADQFKQEYFRKPVH 538
            ||..||...:..           :::|:..|... |.|..::....:.||.......:.::.|.|
Human    49 IPPKEWKARQMYDDIEDILIATPLQQVTSGQGGV-FTQYHKKKKAMRVGQYRRLANSKKYQTPPH 112

  Fly   539 LVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLP 603
            ....:: |:.:|:   |...:..: ||||:      ||     ||:      |.:...|||.:|.
Human   113 QNFADL-EQRYWK---SHPGNPPI-YGADI------SG-----SLF------EESTKQWNLGHLG 155

  Fly   604 LLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQF 668
            .:.|.:.......|.|:|.|::|.||....|.||.||...|||||||:|||||||.||....:..
Human   156 TILDLLEQECGVVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKTWYVVPPEHGQHL 220

  Fly   669 EETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYN 733
            |...::..|::.......|...|.:::|.:|..|.:|.....|.||||::|||..||||||.|:|
Human   221 ERLARELFPDISRGCEAFLRHKVALISPTVLKENGIPFNCMTQEAGEFMVTFPYGYHAGFNHGFN 285

  Fly   734 FAEAVNFAPADWL---KMGRECVNHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAE 795
            .|||:|||...|:   ||..:|    |.......||.|..|..:..|..:|     .....|:|.
Human   286 CAEAINFATPRWIDYGKMASQC----SCGESTVTFSMDPFVRIVQPESYEL-----WKHRQDLAI 341

  Fly   796 MVDTEKKLRKS--LLEWGVTRAERRA 819
            :..||.::.:|  |..|......|||
Human   342 VEHTEPRVAESQELSNWRDDIVLRRA 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm5NP_523486.1 JmjN 160..201 CDD:128818
ARID_JARID 226..312 CDD:350628
PHD1_Lid_like 450..495 CDD:277078 4/9 (44%)
JmjC 624..740 CDD:396791 51/115 (44%)
zf-C5HC2 830..882 CDD:460750
PLU-1 896..1231 CDD:462475
PHD2_KDM5A 1295..1351 CDD:277079
PHD3_KDM5A_like 1755..1805 CDD:277083
KDM4ENP_001155102.1 JmjN 15..55 CDD:128818 3/5 (60%)
JmjC 176..292 CDD:396791 51/115 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..473
Blue background indicates that the domain is not in the aligned region.

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