| Sequence 1: | NP_523486.1 | Gene: | Kdm5 / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001037701.2 | Gene: | Kdm4b / 301128 | RGDID: | 1588576 | Length: | 1099 | Species: | Rattus norvegicus |
| Alignment Length: | 293 | Identity: | 96/293 - (32%) |
|---|---|---|---|
| Similarity: | 139/293 - (47%) | Gaps: | 43/293 - (14%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 485 IPKGEWLCPRCVVEEVSK-------PQEAFGFEQAEREYTLQQFGQMADQFKQ----EYFRKPVH 538
Fly 539 LVPTEMVEREFWR---IVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLN 600
Fly 601 NLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCA 665
Fly 666 EQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQ 730
Fly 731 GYNFAEAVNFAPADWLKMGR---ECVNHYSMLR 760 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Kdm5 | NP_523486.1 | JmjN | 160..201 | CDD:128818 | |
| ARID_JARID | 226..312 | CDD:350628 | |||
| PHD1_Lid_like | 450..495 | CDD:277078 | 5/9 (56%) | ||
| JmjC | 624..740 | CDD:396791 | 50/115 (43%) | ||
| zf-C5HC2 | 830..882 | CDD:460750 | |||
| PLU-1 | 896..1231 | CDD:462475 | |||
| PHD2_KDM5A | 1295..1351 | CDD:277079 | |||
| PHD3_KDM5A_like | 1755..1805 | CDD:277083 | |||
| Kdm4b | NP_001037701.2 | JmjN | 15..56 | CDD:128818 | 4/7 (57%) |
| JmjC | 176..292 | CDD:396791 | 50/115 (43%) | ||
| PHA03247 | <327..643 | CDD:223021 | |||
| PHD_SF | 686..789 | CDD:473978 | |||
| ePHD_JMJD2B | 798..907 | CDD:277184 | |||
| Tudor_JMJD2B_rpt1 | 920..973 | CDD:410535 | |||
| Tudor_SF | 977..1032 | CDD:470623 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||