Sequence 1: | NP_001245908.1 | Gene: | lid / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_510405.1 | Gene: | jmjd-3.2 / 181543 | WormBaseID: | WBGene00009089 | Length: | 867 | Species: | Caenorhabditis elegans |
Alignment Length: | 958 | Identity: | 186/958 - (19%) |
---|---|---|---|
Similarity: | 299/958 - (31%) | Gaps: | 312/958 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 101 PMNHASSSV--SASKKYHNSCPHPTPTPAPTGHKKSVHTQPHSSNKFDQGKNEEFHFDTPPECPV 163
Fly 164 FRPTTEEFKNPLAYISKIRSIAEKCGI--------------AKILPPATWSPPFAVDVDKLRFVP 214
Fly 215 RVQRLNELEAKTRVKLNFLDQIAK----FWELQGSSLKI--------------PMVERKALDLYT 261
Fly 262 LHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVY------------ 314
Fly 315 ------TSGKVLGPTPTSSGSGSTPVKL----EDGGGTDYKAHEIPTRQQIAPPNETNTRRS--- 366
Fly 367 -----------------KRFGNSNASCGLSGVT-PTTKPSAGVFVKTETKEEFKRDLLSSFNAV- 412
Fly 413 -NSGGSPLATGTTA-NTRGASQKKGGEP---------PALIV------DPLMKYICHICN----- 455
Fly 456 --RGDVEESMLLCDGCDDSYHTFCLLPPL---------TSIPKGE----WLCPRCVVEEVSKPQE 505
Fly 506 AFGFEQ-------AEREYTLQQFGQMA---------------DQFKQEYFRKPVHLVPTEMVERE 548
Fly 549 FWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAESSWNLNNLP--LLED---S 608
Fly 609 ILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMK 673
Fly 674 QAAPELFSS--QPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAE 736
Fly 737 AV--NFAPADWLKMGRECV--NHYSMLRRFCVFSHDELVCKMALEPAKLTFGIATACYIDMAEMV 797
Fly 798 DTEKKLRKSLLEWGVTRAERRAFELVNDDERHCQECNTTCFLSAVACECNDKLIVCLRHYTVLCG 862
Fly 863 CAPEKHTLIYRYTLD--EMPLMLQ---KLKVKAHSFERWLSRCRDIVD 905 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lid | NP_001245908.1 | JmjN | 160..201 | CDD:128818 | 9/54 (17%) |
ARID | 227..312 | CDD:198082 | 18/102 (18%) | ||
PHD1_Lid_like | 450..495 | CDD:277078 | 13/64 (20%) | ||
JmjC | 624..740 | CDD:202224 | 28/119 (24%) | ||
zf-C5HC2 | 830..882 | CDD:280996 | 9/53 (17%) | ||
PLU-1 | 896..1229 | CDD:285609 | 4/10 (40%) | ||
PHD2_KDM5A | 1295..1351 | CDD:277079 | |||
PHD3_KDM5A_like | 1755..1805 | CDD:277083 | |||
jmjd-3.2 | NP_510405.1 | COG5644 | 40..>191 | CDD:227931 | 26/167 (16%) |
JmjC | 577..641 | CDD:214721 | 16/63 (25%) | ||
JmjC | 611..719 | CDD:334913 | 28/119 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0055 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |