Sequence 1: | NP_001245908.1 | Gene: | lid / 33837 | FlyBaseID: | FBgn0031759 | Length: | 1838 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002932734.2 | Gene: | jarid2 / 100217357 | XenbaseID: | XB-GENE-982166 | Length: | 1232 | Species: | Xenopus tropicalis |
Alignment Length: | 1013 | Identity: | 243/1013 - (23%) |
---|---|---|---|
Similarity: | 383/1013 - (37%) | Gaps: | 274/1013 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 AKTEADNTTAAN-----SGGGGVGSGTSSGGGASAN------GTATP------------------ 38
Fly 39 ------ARRLRTRNSTGNGTNSGSESVKKSNAN-DEPSTPVTPAGATGSHTHAPPGISPAVMERP 96
Fly 97 MPSVPMNHASSSVSASKKYHN--------------------SCPHPTPTPAPTG--------HKK 133
Fly 134 SVHT-QPHSSNKFDQGKNEE----FHFDTPPECPVFRPTTEEFKNPLAYISKIRSIAEKCGIAKI 193
Fly 194 LPPATWSPPFAVDVDKLRFVPRVQRLNELEAKTRVKLNFLDQIAKFWELQGSSL-KIPMVERKAL 257
Fly 258 DLYTLHRIVQEEGGMEQTTKDRKWAKVANRMQYPSSKSVGATLKAHYERILHPFEVY----TSGK 318
Fly 319 VLGPTPTSSGSGSTPVKLEDGGGTDYKAHEIPTRQQIAPPNETNTRRSKRFGNSNASCGLSGVTP 383
Fly 384 TTKPSAGVFVKTETKEEFKRDLLSSFNAVNSGGSPLATGTTANTRGASQKKG--GEPPALIVDPL 446
Fly 447 MKYICHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCVVEEVSKPQEAFGFEQ 511
Fly 512 AEREYTLQQFGQMADQFKQEYFRKPVHLVPT-EMVEREFWRIVSSIDEDVTVEYGADLHTMDHGS 575
Fly 576 GFPTKSSLYLLPGDQEYAESSWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCW-HNE 639
Fly 640 DHWSYSINYLHWGEPKTWYGVPG---SCAEQFEETMKQAAPELFSSQPDLLHQLV---TIMNPNI 698
Fly 699 LMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFC 763
Fly 764 V--FSHDELVCKMALEPAKL----TFGIATACYIDMAEMVDTEKKLRKSLLEWGVTRAER----- 817
Fly 818 ------------RAFELVNDDERHCQECNTTCFLSAVACECNDKLIVC----LRHYTVLCGCAPE 866
Fly 867 KHTLIYRYTLDEMPLMLQKL--KV--KAHSFERWLSRC 900 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lid | NP_001245908.1 | JmjN | 160..201 | CDD:128818 | 20/40 (50%) |
ARID | 227..312 | CDD:198082 | 23/85 (27%) | ||
PHD1_Lid_like | 450..495 | CDD:277078 | 5/44 (11%) | ||
JmjC | 624..740 | CDD:202224 | 38/122 (31%) | ||
zf-C5HC2 | 830..882 | CDD:280996 | 19/55 (35%) | ||
PLU-1 | 896..1229 | CDD:285609 | 1/5 (20%) | ||
PHD2_KDM5A | 1295..1351 | CDD:277079 | |||
PHD3_KDM5A_like | 1755..1805 | CDD:277083 | |||
jarid2 | XP_002932734.2 | JmjN | 544..585 | CDD:128818 | 20/40 (50%) |
ARID_JARD2 | 608..719 | CDD:350634 | 29/141 (21%) | ||
JmjC | 902..1017 | CDD:334913 | 38/122 (31%) | ||
zf-C5HC2 | 1125..1178 | CDD:367254 | 19/55 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D664180at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10694 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.020 |