DRSC/TRiP Functional Genomics Resources

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Protein Alignment ifc and ttm-5

DIOPT Version :9

Sequence 1:NP_476594.1 Gene:ifc / 33836 FlyBaseID:FBgn0001941 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_493549.1 Gene:ttm-5 / 173327 WormBaseID:WBGene00013197 Length:362 Species:Caenorhabditis elegans


Alignment Length:317 Identity:175/317 - (55%)
Similarity:239/317 - (75%) Gaps:0/317 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGQKVSRTDFEWVYTEEPHASRRKIILEKYPQIKKLFGHDPNFKWVAGAMVLTQILALFVVKDLS 65
            |||.|||.||.|..||:||.|||:.|::|||::|||||.||:.|:|..::|:.||...::::|..
 Worm     1 MGQSVSRDDFIWTLTEQPHMSRREEIVKKYPEVKKLFGVDPSLKYVVSSLVIFQIFMCWLLQDAD 65

  Fly    66 WSWLIVAAYCFGGIINHSLMLAVHEISHNLAFGHSRPMHNRILGFICNLPIGLPMSISFKKYHLE 130
            |..:|:.||..||||||::.||:|:||||.|||:..|:.||..|...||||.:|:|:||||||:|
 Worm    66 WILIILEAYFCGGIINHAMTLAIHDISHNTAFGNKYPLKNRFFGMWANLPIAVPISVSFKKYHVE 130

  Fly   131 HHRYQGDEAIDTDIPTLLEARLFDTTFGKFLWVCLQPFFYIFRPLIINPKPPTRLEIINTVVQLT 195
            ||||.|::.:|||:||..||..|.|...|.||:.||||||.||||||..|.||.:||:|.::|::
 Worm   131 HHRYLGEDGLDTDVPTTFEAEFFTTAPRKLLWLALQPFFYGFRPLIIYKKAPTDMEILNAIIQIS 195

  Fly   196 FNALIVYFLGWKPLAYLLIGSILAMGLHPVAGHFISEHYMFAKGFETYSYYGPLNWITFNVGYHN 260
            |:.||::|.|.|.|.|||.|:|::|||||.|||||||||.|.:..||:||||..|..|||||||.
 Worm   196 FDLLILHFFGVKSLFYLLFGTIISMGLHPSAGHFISEHYAFKEDQETFSYYGLWNLCTFNVGYHV 260

  Fly   261 EHHDFPAVPGSRLPEVKRIAKEFYDTMPQHTSWTRVLYDFIMDPAVGPYARVKRRQR 317
            ||||||.:||..||:::.:|.|:|:.:.:|||..::|.:|:::||:|||||:||:.|
 Worm   261 EHHDFPYIPGRDLPKLRAMAPEYYENLLKHTSMMQILTEFVVNPAMGPYARLKRKPR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ifcNP_476594.1 PLN02579 3..315 CDD:215316 171/311 (55%)
Lipid_DES 6..42 CDD:285726 22/35 (63%)
Delta4-sphingolipid-FADS-like 26..315 CDD:239585 157/288 (55%)
ttm-5NP_493549.1 PLN02579 3..316 CDD:215316 172/312 (55%)
Lipid_DES 6..41 CDD:285726 21/34 (62%)
Delta4-sphingolipid-FADS-like 26..315 CDD:239585 157/288 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166764
Domainoid 1 1.000 280 1.000 Domainoid score I889
eggNOG 1 0.900 - - E1_KOG2987
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23617
Inparanoid 1 1.050 390 1.000 Inparanoid score I1140
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53934
OrthoDB 1 1.010 - - D1255438at2759
OrthoFinder 1 1.000 - - FOG0001222
OrthoInspector 1 1.000 - - otm14351
orthoMCL 1 0.900 - - OOG6_101167
Panther 1 1.100 - - LDO PTHR12879
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R304
SonicParanoid 1 1.000 - - X762
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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