DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and rhlE

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_415318.1 Gene:rhlE / 945425 ECOCYCID:EG11235 Length:454 Species:Escherichia coli


Alignment Length:385 Identity:127/385 - (32%)
Similarity:211/385 - (54%) Gaps:36/385 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDT- 94
            :||.:.|..::||.:...|:.:|:.|||:||...:.|||::|.||:||||||.|::.:||.:.| 
E. coli     2 SFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHLITR 66

  Fly    95 -----SIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVG 154
                 ..|..:||||.||||||.||...|....:|:.:.|....||.::......|..|..|:|.
E. coli    67 QPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKLRGGVDVLVA 131

  Fly   155 TPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLE 219
            ||||:.|:.::..::...:::.||||||.||..||...|:.|...||...|.:|.|||...|:..
E. coli   132 TPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKA 196

  Fly   220 VSRCFMRDPVSILVKKEELTLEGIKQ--FYVNVKQE-----------NWKLGTLCDLYDTLSITQ 271
            ::...:.:|:.|.|.:.....:.:.|  .:|:.|::           ||:              |
E. coli   197 LAEKLLHNPLEIEVARRNTASDQVTQHVHFVDKKRKRELLSHMIGKGNWQ--------------Q 247

  Fly   272 SVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQ 336
            .::|..|:...:.|.::::......:|:||:..|..|...:..|:||..|||:.||:.|||:|::
E. coli   248 VLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIE 312

  Fly   337 QVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMP 396
            ::..|:||:||:..|:|:|||||.||....|.|::.:..|:.::|:|||:...   :|:|
E. coli   313 ELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLK---KEIP 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 127/385 (33%)
rhlENP_415318.1 PRK10590 1..454 CDD:236722 127/385 (33%)

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