DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and AT1G72730

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_177417.1 Gene:AT1G72730 / 843605 AraportID:AT1G72730 Length:414 Species:Arabidopsis thaliana


Alignment Length:388 Identity:263/388 - (67%)
Similarity:323/388 - (83%) Gaps:0/388 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 EPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGK 80
            |.|....:.:.||.|:||.|.|:.:||||||.||||||||||||.|||..:|.|||.||||||||
plant    27 EGEETFYTNYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGK 91

  Fly    81 TATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARIL 145
            ||||...:|||:|.|:.:||||:||||||||.||::|:.|||:|:.|.:.||:|||:||||.|:|
plant    92 TATFCSGVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVL 156

  Fly   146 ESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLS 210
            :||.||||||||||:|::.|:.||...||:||||||||||||||||||.|:|::||..|||.:.|
plant   157 QSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFS 221

  Fly   211 ATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIF 275
            |||||:.||::|.||..||.||||::||||||||||||||.:|.|||.||||||:||:|||||||
plant   222 ATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAITQSVIF 286

  Fly   276 CNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSL 340
            .|||||||.||.:|...:.||||.||||:|..|::||::||||||||||||||||||||||||||
plant   287 VNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSL 351

  Fly   341 VINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
            |||:|||:..|||:|||||.||||||||||||:|.:|.|::.||::||:..:||:|:|:|||:
plant   352 VINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYNVVVEELPSNVADLL 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 262/386 (68%)
DEADc 32..232 CDD:238167 133/199 (67%)
Helicase_C 254..358 CDD:278689 77/103 (75%)
AT1G72730NP_177417.1 PTZ00424 28..414 CDD:185609 261/385 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 228 1.000 Domainoid score I663
eggNOG 1 0.900 - - E2759_KOG0327
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 544 1.000 Inparanoid score I263
OMA 1 1.010 - - QHG53631
OrthoDB 1 1.010 - - D726081at2759
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 1 1.000 - - otm2465
orthoMCL 1 0.900 - - OOG6_101294
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X250
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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