DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and AT1G51380

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_175549.1 Gene:AT1G51380 / 841562 AraportID:AT1G51380 Length:392 Species:Arabidopsis thaliana


Alignment Length:388 Identity:222/388 - (57%)
Similarity:299/388 - (77%) Gaps:2/388 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 SMEPEGVIESTWHEV--YDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQS 76
            :::.|.::..|...:  ..:||||.:.:::|||:|.||::|||.|||||::|.::||||||||||
plant     4 TLDEENLVFETTKGIKPIKSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQS 68

  Fly    77 GTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVRED 141
            |||||:..:|::.|.::.|.|:.|.|:|:|:||||:|.::.:.|:|.:..:.:||||||.::.||
plant    69 GTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGED 133

  Fly   142 ARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQV 206
            .:.||.|.|.|.||||||||||.|..|:|:.:||.||||:|||||:|.||||.||::.||.|:||
plant   134 IKKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQV 198

  Fly   207 ILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQ 271
            .|:|||:|.::||::..||.|||.||||.:|||||||||:||:|.:|.||..||||||..|:|.|
plant   199 CLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGRLTINQ 263

  Fly   272 SVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQ 336
            ::||||||:|||.||::|...||.||:||||..|::|:.||.||||..|||||.:|:.|||||||
plant   264 AIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIASDVWARGIDVQ 328

  Fly   337 QVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANI 399
            .||.|||||:|:|.|.|||||||.|||||:||||||:...|.:.|||||:.|.|.|.||||::
plant   329 TVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIERHYGTKIREMPADL 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 222/388 (57%)
DEADc 32..232 CDD:238167 110/199 (55%)
Helicase_C 254..358 CDD:278689 66/103 (64%)
AT1G51380NP_175549.1 PTZ00424 21..391 CDD:185609 220/369 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53631
OrthoDB 1 1.010 - - D726081at2759
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X250
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.930

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