DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and AT3G61240

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_191683.1 Gene:AT3G61240 / 825296 AraportID:AT3G61240 Length:498 Species:Arabidopsis thaliana


Alignment Length:374 Identity:146/374 - (39%)
Similarity:231/374 - (61%) Gaps:2/374 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 DNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQQIDT 94
            :.|:|..|:.:||:|||..||||||.||:.:|...:.|.|::|:|::|||||..|.|.:|::||.
plant   124 NEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEKIDP 188

  Fly    95 SIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVREDARILESGCHVVVGTPGRV 159
            :....||:||.||||||.|..:|...|.:|:.:......|||::|:|...|....|::||||||:
plant   189 NNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPVHLLVGTPGRI 253

  Fly   160 YDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCF 224
            .|:..:.|...:...:.|:||||::||..|:..::::.:.||.:.|.::.|||.|..|.......
plant   254 LDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFLMFSATFPVTVKAFKDRH 318

  Fly   225 MRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEM 289
            :|.|. ::...::|||.|:.|:|..| :|..|:..|..|:..|.|.||:||||:..:|:.|.:::
plant   319 LRKPY-VINLMDQLTLMGVTQYYAFV-EERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKI 381

  Fly   290 SIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYI 354
            :...::...:|..|.|..|..:..:||:|:.|.|:.|||..||||:|.|::|||:|.|...|:|:
plant   382 TELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPRTSESYL 446

  Fly   355 HRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANIADLI 403
            ||:||.||||..|:|:|.:|.:||..:...||...|.|:.:|:||...|
plant   447 HRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKPIPSNIDQAI 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 145/372 (39%)
AT3G61240NP_191683.1 DEADc_DDX6 126..326 CDD:350698 78/200 (39%)
SF2_C_DEAD 336..465 CDD:350174 53/129 (41%)

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