DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and EIF4A-III

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_188610.1 Gene:EIF4A-III / 821513 AraportID:AT3G19760 Length:408 Species:Arabidopsis thaliana


Alignment Length:395 Identity:257/395 - (65%)
Similarity:326/395 - (82%) Gaps:2/395 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GPASMEPEGVIESTWH--EVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQ 73
            |..:|:.:.::..|..  |...:|:||.::|::|||:|.|||||||||||||::|.::|||||||
plant    14 GGGAMDDDKLVFETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQ 78

  Fly    74 AQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNV 138
            ||||||||:..::::.|.:|||.||.|||||:||||||||.::.:.|:|.:..:.:||||||.:|
plant    79 AQSGTGKTSMIALSVCQVVDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSV 143

  Fly   139 REDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPD 203
            .||.|.||.|.|||.||||||.|||.|:.|||:.|||.:|||:||||||||||||.||::.||||
plant   144 GEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPD 208

  Fly   204 VQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLS 268
            :||.|:|||:|.::||::..||.:||.||||::||||||||||:|.|::|.||..|||||||||:
plant   209 LQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLT 273

  Fly   269 ITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGI 333
            |||:||||||:||||.|:::|..||||||:|||||.|::|:.||.:||||.||||||||:.||||
plant   274 ITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWARGI 338

  Fly   334 DVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPAN 398
            ||||||||||||||:|||.|||||||.||||||||||||:..||.:||:||||:|.|.|:|||.|
plant   339 DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMN 403

  Fly   399 IADLI 403
            :||||
plant   404 VADLI 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 255/393 (65%)
EIF4A-IIINP_188610.1 DEAD-like_helicase_N 32..408 CDD:475120 252/375 (67%)

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