DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and Eif4a3l1

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001136206.1 Gene:Eif4a3l1 / 668137 MGIID:3644226 Length:411 Species:Mus musculus


Alignment Length:399 Identity:266/399 - (66%)
Similarity:326/399 - (81%) Gaps:7/399 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IPQDGPASMEPEGVIESTWHEV--YDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRD 69
            :.:||...:|.|     |..||  ...||.|.|||:||||||.||||||||||||||...::|||
Mouse    18 LKEDGMTKVEFE-----TSEEVDATPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIMKGRD 77

  Fly    70 VIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIG 134
            ||||:||||||||||||::||.:|..:||.||||||||||||.|||:.::|||:||.|..|||:|
Mouse    78 VIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACVG 142

  Fly   135 GTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKM 199
            ||||.||.|.|:.|.|||.||||||:|||.|:.|.|:.||:.|||||||||:||||:||.||::.
Mouse   143 GTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLTTRAIKMLVLDEADEMLNRGFKEQIYDVYRY 207

  Fly   200 LPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLY 264
            |||..||:|:|||:|.::||::..||..|:.||||::||||||||||:|.|::|.||..||||||
Mouse   208 LPPATQVVLVSATLPHEILEMTNKFMTHPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLY 272

  Fly   265 DTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLL 329
            |||:|||:||||.|:||||.||::|...|||||:|||||.|::||.|||:||||:|||||:||:.
Mouse   273 DTLTITQAVIFCITKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVW 337

  Fly   330 ARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEE 394
            |||:||.||||:||||||:|||.|||||||.||:|||||||||:.:||.|||:||||:|.|.|:|
Mouse   338 ARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDE 402

  Fly   395 MPANIADLI 403
            ||.|:||||
Mouse   403 MPMNLADLI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 264/397 (66%)
DEADc 32..232 CDD:238167 133/199 (67%)
Helicase_C 254..358 CDD:278689 75/103 (73%)
Eif4a3l1NP_001136206.1 PTZ00424 22..411 CDD:185609 263/393 (67%)
DEADc 40..240 CDD:238167 133/199 (67%)
HELICc 251..380 CDD:238034 94/128 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53631
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X250
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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