DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and eif4a1

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001011139.1 Gene:eif4a1 / 496556 XenbaseID:XB-GENE-491256 Length:406 Species:Xenopus tropicalis


Alignment Length:398 Identity:296/398 - (74%)
Similarity:352/398 - (88%) Gaps:2/398 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PQD-GPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVI 71
            |:| ||..|||:|||||.|:||.|:||||:|.|.||||||.||||||||||||||:||::|.|||
 Frog     9 PRDNGPEGMEPDGVIESNWNEVVDSFDDMSLSESLLRGIYAYGFEKPSAIQQRAIMPCIKGYDVI 73

  Fly    72 AQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGT 136
            |||||||||||||:|:|||||:..::..|||:||||||||.|||:||||||:||....|||||||
 Frog    74 AQAQSGTGKTATFAISILQQIELDMKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGT 138

  Fly   137 NVREDARILESGC-HVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKML 200
            |||.:.:.|:|.. |:||||||||:||:||:.|..:|||:||||||||||||||||||.|:|:.|
 Frog   139 NVRAEVQKLQSEAPHIVVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKL 203

  Fly   201 PPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYD 265
            ..:.||:|||||||.|||||::.|||||:.|||||||||||||:|||:||::|.|||.||||||:
 Frog   204 SSNAQVVLLSATMPADVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYE 268

  Fly   266 TLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLA 330
            ||:|||:|||.|||||||.||::|...:|||||:||||:|::|:|||::||||||||||||||||
 Frog   269 TLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333

  Fly   331 RGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEM 395
            |||||||||||||||||:|||||||||||||||||||||||.:|:||:|.|||||.||:||:|||
 Frog   334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEDDKRTLKDIETFYNTTVEEM 398

  Fly   396 PANIADLI 403
            |.|:||||
 Frog   399 PMNVADLI 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 294/396 (74%)
DEADc 32..232 CDD:238167 142/200 (71%)
Helicase_C 254..358 CDD:278689 82/103 (80%)
eif4a1NP_001011139.1 PTZ00424 20..406 CDD:185609 287/385 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 232 1.000 Domainoid score I2366
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 609 1.000 Inparanoid score I911
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D321438at33208
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 1 1.000 - - otm48604
Panther 1 1.100 - - LDO PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R594
SonicParanoid 1 1.000 - - X250
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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