DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and CG9630

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster


Alignment Length:372 Identity:111/372 - (29%)
Similarity:201/372 - (54%) Gaps:33/372 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQ--- 90
            :.:.|...|.:.:|:.:..:||::.:.:|..||...:..:||.|:|.:|:|||..|.:.:|:   
  Fly     6 WSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQ 70

  Fly    91 ----QIDTSIRECQALILAPTRELATQIQRVVMALGEYMK------VHSHACIGGTNVREDARIL 145
                :.....:|..||:::||||||.||..|   |.::::      ::....:||.::.||...|
  Fly    71 RRHKETPWGPKEIGALVISPTRELARQISEV---LAQFLEHEDLEHLNQQLIVGGNSIEEDIATL 132

  Fly   146 --ESGCHVVVGTPGRVYDMINRK------VLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPP 202
              |:.| ::|.||||:.|:..||      ..:.:.::..||||||.:|..|||..:.::...||.
  Fly   133 RRETPC-ILVCTPGRLEDLFQRKGDDLNLAAQVKSLEFLVLDEADRLLDLGFKTSVNNILGYLPR 196

  Fly   203 DVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEEL--TLEGIKQFYVNVKQENWKLGTLCDLYD 265
            ..:..|.|||...:|.::.|..:|:||.:.||::..  |...::.||..|:.| .|...|.:...
  Fly   197 QRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKEKASVNTPARLQNFYRIVEPE-LKFVALLEFLS 260

  Fly   266 TLS--ITQSVIFCNTRRKVDQLTQEMS--IHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITT 326
            :.:  |.:.::|..|...|:...:.:.  :...||..:||.|:.: |..::::||:....||:.|
  Fly   261 SPATVIGKVMVFFPTCACVEYWAEALPPLLPKRTVLGIHGKMKNK-RANVVEKFRNTPQAVLLCT 324

  Fly   327 DLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFI 373
            |:||||:||.::..|:.:|.||...:::||:||..|.|.:|.|:.|:
  Fly   325 DVLARGLDVPEIEWVVQWDPPSTASSFVHRVGRTARQGNEGNALVFL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 111/372 (30%)
CG9630NP_649777.1 DEADc_DDX55 18..226 CDD:350718 65/211 (31%)
SF2_C_DEAD 239..371 CDD:350174 40/133 (30%)
DUF4217 414..470 CDD:464056
Blue background indicates that the domain is not in the aligned region.

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