DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and eif4a2

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_998616.2 Gene:eif4a2 / 406760 ZFINID:ZDB-GENE-040426-2802 Length:411 Species:Danio rerio


Alignment Length:394 Identity:291/394 - (73%)
Similarity:352/394 - (89%) Gaps:1/394 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQ 75
            ||..|||:|||||.|:|:.||||||||:|.||||||.|||||||||||||||||::|.|||||||
Zfish    18 GPEGMEPDGVIESNWNEITDNFDDMNLKETLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQ 82

  Fly    76 SGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTNVRE 140
            |||||||||:|:||||::...:|.|||:||||||||.|||:|::|||:||....||||||||||.
Zfish    83 SGTGKTATFAISILQQLEIEQKETQALVLAPTRELAQQIQKVILALGDYMGASCHACIGGTNVRN 147

  Fly   141 DARILESGC-HVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPPDV 204
            :.:.|::.. |:||||||||:||:||:.|..::||:||||||||||||||||||.::|:.|..::
Zfish   148 EMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNI 212

  Fly   205 QVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGTLCDLYDTLSI 269
            ||:|||||||.|||||:..|||:||.|||||||||||||||||:||::|.|||.||||||:||:|
Zfish   213 QVVLLSATMPADVLEVTTKFMREPVRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTI 277

  Fly   270 TQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARGID 334
            ||:|||.|||||||.||::|...:|||||:||||:|::|::||::||||||||||||||||||||
Zfish   278 TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLARGID 342

  Fly   335 VQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQFYHTTIEEMPANI 399
            |||||||||||||:||||||||||||||||||||||||:|::|:|||:|||.||:||:||||.|:
Zfish   343 VQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNV 407

  Fly   400 ADLI 403
            ||||
Zfish   408 ADLI 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 289/392 (74%)
DEADc 32..232 CDD:238167 139/200 (70%)
Helicase_C 254..358 CDD:278689 81/103 (79%)
eif4a2NP_998616.2 PTZ00424 25..411 CDD:185609 284/385 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 230 1.000 Domainoid score I2383
eggNOG 1 0.900 - - E2759_KOG0327
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 606 1.000 Inparanoid score I896
OMA 1 1.010 - - QHG53631
OrthoDB 1 1.010 - - D321438at33208
OrthoFinder 1 1.000 - - FOG0000304
OrthoInspector 1 1.000 - - otm24646
orthoMCL 1 0.900 - - OOG6_101294
Panther 1 1.100 - - O PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R594
SonicParanoid 1 1.000 - - X250
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.910

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