DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and Ddx1

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_524212.2 Gene:Ddx1 / 40457 FlyBaseID:FBgn0015075 Length:727 Species:Drosophila melanogaster


Alignment Length:341 Identity:95/341 - (27%)
Similarity:165/341 - (48%) Gaps:57/341 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 QALILAPTRELATQIQRVVMALGEYM---KVHSHACIGGTNVREDARILESGCHVVVGTPGRVYD 161
            ||:|:.|:||||.|....:.....::   :|.|...|||..:.|....|..|.|:|||||||:.:
  Fly   288 QAIIMEPSRELAEQTYNQIEKFKYHLSNPEVRSLLLIGGVRLEEQKAQLMQGTHIVVGTPGRLEE 352

  Fly   162 MINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLPP------DVQVILLSATMPP-DVLE 219
            |||..::...:.:.|||||||.:|.:|:.:.|..:.|.:|.      .:|:::.|||:.. :|.:
  Fly   353 MINSGLVLLTHCRFFVLDEADALLKQGYTELIDRLHKQIPKITSDGRRLQMVVCSATLHAFEVKK 417

  Fly   220 VSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQE---NW-------------------------- 255
            ::...|..|..:.:|.|:...|.:......|..:   .|                          
  Fly   418 MAERLMHFPTWVDLKGEDAVPETVHHVVCLVDPQMDTTWQSLRQPIGTDGVHDRDNVHPGNHSKE 482

  Fly   256 ------KL--GTLC-DLYDTLSITQSVIFCNTRRKVDQL---TQEMSIHNFTVSAMHGDMEQRDR 308
                  ||  |..| ...|..::.:::|||.|::..|.|   .::....:::...:|||.:.::|
  Fly   483 TLSQAVKLLKGEYCVHAIDKHNMDRAIIFCRTKQDCDNLERFLRQRGGKHYSCVCLHGDRKPQER 547

  Fly   309 EVIMKQFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFI 373
            :..::.|:....:.||.||:.|||:|:..:..:||..||.::.||:|||||.||..|.|:||:.:
  Fly   548 KENLEMFKRQQVKFLICTDVAARGLDITGLPFMINVTLPDDKTNYVHRIGRVGRAERMGLAISLV 612

  Fly   374 TDDDRRILKDIEQFYH 389
            .....::      :||
  Fly   613 ATVPEKV------WYH 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 95/341 (28%)
Ddx1NP_524212.2 DEAD-like_helicase_N 4..>73 CDD:475120
SPRY_DDX1 91..242 CDD:293933
SrmB 283..613 CDD:440279 93/324 (29%)
Blue background indicates that the domain is not in the aligned region.

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