DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and CG10077

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_648062.2 Gene:CG10077 / 38756 FlyBaseID:FBgn0035720 Length:818 Species:Drosophila melanogaster


Alignment Length:410 Identity:142/410 - (34%)
Similarity:219/410 - (53%) Gaps:28/410 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NEIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRD 69
            |||...|  ...|...||         |::....:.::..|...||.||:|||.:.....:.|||
  Fly   143 NEITIKG--DQVPTPSIE---------FEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRD 196

  Fly    70 VIAQAQSGTGKTATFSIAILQQIDTSIRECQ-----ALILAPTRELATQIQRVVMALGEYMKVHS 129
            ::..||:|:|||..:.:..:..|:...|..:     ||:||||||||.|||:|.:..|....|.:
  Fly   197 LVGVAQTGSGKTLAYVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRN 261

  Fly   130 HACIGGTNVREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQ 194
            ....||....:.||.||.|..:|:.||||:.|.:.|.....:.....||||||.||..||:.||:
  Fly   262 TCIFGGAPKGQQARDLERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIR 326

  Fly   195 DVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTL-EGIKQFYVNVKQENWKLG 258
            .:.:.:.||.||::.|||.|.:|.:::..|:.:.:.:.:....|:. ..|.|. |:|..||.||.
  Fly   327 KIMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQI-VDVCDENEKLM 390

  Fly   259 TLCDLYDTLSI---TQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSS 320
            .|..|...:|.   |:::||..|:::||::|:.:|...:...|:|||..|::|:.::..||:|..
  Fly   391 KLIKLLTDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRH 455

  Fly   321 RVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFIT-------DDDR 378
            .:|:.||:.|||:||..|..|||||.|||.|:|:|||||.||....|.|....|       :|..
  Fly   456 SILVATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKANDLI 520

  Fly   379 RILKDIEQFYHTTIEEMPAN 398
            ::|::..|..:..:..|..|
  Fly   521 QVLREANQTINPKLMNMAMN 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 141/409 (34%)
CG10077NP_648062.2 DEAD-like_helicase_N 49..544 CDD:475120 142/410 (35%)

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