DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and Dbp80

DIOPT Version :10

Sequence 1:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001263168.1 Gene:Dbp80 / 3354919 FlyBaseID:FBgn0024804 Length:481 Species:Drosophila melanogaster


Alignment Length:397 Identity:143/397 - (36%)
Similarity:231/397 - (58%) Gaps:30/397 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 EIPQDGPASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRG--- 67
            :|.|..|         .|..|.| ..|:.::|:..||:|||..||..||.||:.| :|.:..   
  Fly    59 DIQQKNP---------NSPLHSV-KTFEALHLKASLLKGIYAMGFNTPSKIQETA-LPTLLADPP 112

  Fly    68 RDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMK-VHSHA 131
            :::|||:||||||||.|.:|:|.:::..:...|.|.|:||.|||.|...|...:|::.: :....
  Fly   113 QNMIAQSQSGTGKTAAFVLAMLSRVNVCLNHPQVLCLSPTYELAIQTGEVAARMGQFCREIKLRF 177

  Fly   132 CIGGTNVREDARILESGCHVVVGTPGRVYDM-INRKVLRTQYIKLFVLDEADEML-SRGFKDQIQ 194
            .:.|..|....:|.|   |:::||||::.|. |..::...:.|.:|||||||.|: ::|..||..
  Fly   178 AVRGEEVDRSKKIEE---HILIGTPGKLLDWGIKFRLFDMKKISVFVLDEADVMIATQGHHDQCI 239

  Fly   195 DVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKLGT 259
            .:.|||.|..|::..|||...:|::.:|..:.||..|.:.:||.:||.|||:||..|.|..|...
  Fly   240 RIHKMLNPHCQMLFFSATYGKEVMDFARLIVADPTIIRLMREEESLENIKQYYVKCKNEEGKYNA 304

  Fly   260 LCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLI 324
            :.::|..:|:.|::|||:|:|....|..:|:....:|:.:.||:....|..::.:||||..:|||
  Fly   305 IQNIYGCISVGQAIIFCHTKRTAAWLAAKMTSDGHSVAVLTGDLTVVQRLDVLDRFRSGLEKVLI 369

  Fly   325 TTDLLARGIDVQQVSLVINYDLP------SNRENYIHRIGRGGRFGRKGVAINF----ITDDDRR 379
            ||::|:||||::||::|:|:|||      ::.|.|:|||||.|||....:..|.    :..:..:
  Fly   370 TTNILSRGIDIEQVTIVVNFDLPVDLDGMADCETYLHRIGRTGRFEPSALTRNSPIFGVKAESGK 434

  Fly   380 ILKDIEQ 386
            |.|:|.:
  Fly   435 IGKEINR 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 143/397 (36%)
Dbp80NP_001263168.1 DEADc_DDX19_DDX25 80..277 CDD:350721 74/200 (37%)
SF2_C_DEAD 288..414 CDD:350174 51/125 (41%)

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