DRSC/TRiP Functional Genomics Resources

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Protein Alignment eIF4A and CG8611

DIOPT Version :9

Sequence 1:NP_001245907.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster


Alignment Length:448 Identity:108/448 - (24%)
Similarity:209/448 - (46%) Gaps:100/448 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 HEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSGTGKTATFSIAILQ 90
            |.|.:..|.:::||             .:::||:.|...::|:||:.::|:|:|||..:::.:::
  Fly   337 HAVKNLEDLLSIRE-------------LTSVQQKTIPEVLQGKDVLVRSQTGSGKTLAYALPLVE 388

  Fly    91 QIDTSIRECQ------ALILAPTRELATQIQRVVMALGE-YMKVHSHACIGGTNVREDARILESG 148
            .:.......|      ||::.|||||..|...::..|.: |..:...:.:||.:.:.:...|..|
  Fly   389 LLQKQQPRIQRKDGVLALVIVPTRELVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKG 453

  Fly   149 CHVVVGTPGRVYD-MINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVFKMLP----------- 201
            .::::|||||:.| :::....:...::..:|||||.:|..|::..::.:.:.:.           
  Fly   454 INILIGTPGRLVDHLLHTASFKLTKLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKEL 518

  Fly   202 PDVQVILLSATMPPDVLEVSRCFMRDPVSI----------LVKKE-------ELTLE---GIKQF 246
            |.:|.:|||||:...|.:::...:::|:.|          |..|:       |..||   |:.::
  Fly   519 PQLQRMLLSATLTSQVQQLAGLTLKNPLYIDNSDEAASAALKSKDGYQKETIEALLEVDDGLGEY 583

  Fly   247 YVNVK-----QENWKL---------------GTLCDLYDT----------LSITQSVIFCN---- 277
            ..:|.     .||.:|               ..|....|.          :|.|:.|.|.:    
  Fly   584 QEDVTGVLSIPENLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLN 648

  Fly   278 ---TRRKVDQLTQEMS-----------IHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDL 328
               |||.:|:..::..           :.......:||.|.|.:|:.:.:.||..:|.||:.||:
  Fly   649 EALTRRVLDEEDEQEKGDSDDDGDIPLLQGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDV 713

  Fly   329 LARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDIEQ 386
            :.|||||..:.||:.|..|....:::||:||..|.||||.|:.|:|..:.:.::.:|:
  Fly   714 VGRGIDVPDIKLVVQYTPPQTTADFVHRVGRTARAGRKGRAVLFLTPSEAQFVRHLEK 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
eIF4ANP_001245907.1 PTZ00424 6..403 CDD:185609 108/448 (24%)
DEADc 32..232 CDD:238167 52/228 (23%)
Helicase_C 254..358 CDD:278689 35/146 (24%)
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302
P-loop_NTPase 332..548 CDD:304359 53/223 (24%)
DEXDc 348..554 CDD:214692 51/218 (23%)
HELICc 601..757 CDD:238034 41/155 (26%)
DUF4217 805..866 CDD:290667
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451629
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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